Download MendeleyThe High Resolution Crystal Structure of Bovine Spleen Purine Nucleoside Phosphorylase in Complex Forms with Phosphate and 9-Deazainosine
Pugmire, M.J., Mao, C., Ealick, S.E.To be published.
4PNP
THE HIGH RESOLUTION CRYSTAL STRUCTURE OF BOVINE SPLEEN PURINE NUCLEOSIDE PHOSPHORYLASE IN COMPLEX FORMS WITH PHOSPHATE AND 9-DEAZAINOSINE
- PDB DOI: https://doi.org/10.2210/pdb4PNP/pdb
- Classification: PHOSPHORYLASE
- Organism(s): Bos taurus
- Mutation(s): No
- Deposited: 1998-03-30 Released: 1999-03-30
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.248
- R-Value Work: 0.222
- R-Value Observed: 0.222
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| PURINE NUCLEOSIDE PHOSPHORYLASE | 289 | Bos taurus | Mutation(s): 0 EC: 2.4.2.1 |  | |
UniProt | |||||
Find proteins for P55859 (Bos taurus) Explore P55859 Go to UniProtKB: P55859 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P55859 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PO4 Query on PO4 | B [auth A] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.248
- R-Value Work: 0.222
- R-Value Observed: 0.222
- Space Group: P 21 3
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 92.72 | α = 90 |
| b = 92.72 | β = 90 |
| c = 92.72 | γ = 90 |
| Software Name | Purpose |
|---|---|
| X-PLOR | model building |
| X-PLOR | refinement |
| DENZO | data reduction |
| SCALEPACK | data scaling |
| X-PLOR | phasing |
Entry History
Deposition Data
- Released Date: 1999-03-30 Deposition Author(s): Pugmire, M.J., Mao, C., Ealick, S.E.
Revision History (Full details and data files)
- Version 1.0: 1999-03-30
Type: Initial release - Version 1.1: 2008-03-25
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Derived calculations, Version format compliance - Version 1.3: 2011-11-16
Changes: Atomic model - Version 1.4: 2024-02-28
Changes: Data collection, Database references, Derived calculations, Other
