Download MendeleyCatalytic domain of LPMO Lmo2467 from Listeria monocytogenes
Light, S.H., Agostoni, M., Marletta, M.A., Anderson, W.F.To be published.
5L2V
Catalytic domain of LPMO Lmo2467 from Listeria monocytogenes
- PDB DOI: https://doi.org/10.2210/pdb5L2V/pdb
- Classification: CHITIN-BINDING PROTEIN
- Organism(s): Listeria monocytogenes 10403S
- Expression System: Escherichia coli BL21
- Mutation(s): No
- Deposited: 2016-08-02 Released: 2017-08-09
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.10 Å
- R-Value Free: 0.145
- R-Value Work: 0.129
- R-Value Observed: 0.129
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Chitin-binding protein | 166 | Listeria monocytogenes 10403S | Mutation(s): 0 Gene Names: LMRG_01781 |  | |
UniProt | |||||
Find proteins for A0A0H3GIZ6 (Listeria monocytogenes serotype 1/2a (strain 10403S)) Explore A0A0H3GIZ6 Go to UniProtKB: A0A0H3GIZ6 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A0H3GIZ6 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| P33 Query on P33 | D [auth A] | 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL C14 H30 O8 XPJRQAIZZQMSCM-UHFFFAOYSA-N |  | ||
| CU Query on CU | C [auth A], E [auth B] | COPPER (II) ION Cu JPVYNHNXODAKFH-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.10 Å
- R-Value Free: 0.145
- R-Value Work: 0.129
- R-Value Observed: 0.129
- Space Group: C 2 2 21
- Diffraction Data: https://doi.org/10.18430/m35l2v
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 61.575 | α = 90 |
| b = 139.712 | β = 90 |
| c = 90.591 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| PHASER | phasing |
Entry History
Deposition Data
- Released Date: 2017-08-09 Deposition Author(s): Light, S.H., Agostoni, M., Marletta, M.A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
Revision History (Full details and data files)
- Version 1.0: 2017-08-09
Type: Initial release - Version 1.1: 2023-10-04
Changes: Data collection, Database references, Derived calculations, Refinement description, Structure summary
