Flexibility of a Distal Interface Loop Modulates Water Network in the Active Site of Bacillus sp. TB-90 Urate Oxidase
Hibi, T., Itoh, T., Nishiya, Y.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Uric acid degradation bifunctional protein | 323 | Bacillus sp. TB-90 | Mutation(s): 1  Gene Names: uao EC: 1.7.3.3 (PDB Primary Data), 4.1.1.97 (UniProt) | ||
UniProt | |||||
Find proteins for Q45697 (Bacillus sp. (strain TB-90)) Explore Q45697  Go to UniProtKB:  Q45697 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q45697 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 5 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
AZA Query on AZA | C [auth A], G [auth B] | 8-AZAXANTHINE C4 H3 N5 O2 KVGVQTOQSNJTJI-UHFFFAOYSA-N | |||
SO4 Query on SO4 | D [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
EDO Query on EDO | I [auth B], J [auth B] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
K Query on K | H [auth B] | POTASSIUM ION K NPYPAHLBTDXSSS-UHFFFAOYSA-N | |||
OXY Query on OXY | E [auth A], F [auth B] | OXYGEN MOLECULE O2 MYMOFIZGZYHOMD-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
OCS Query on OCS | A, B | L-PEPTIDE LINKING | C3 H7 N O5 S | CYS |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 70.496 | α = 90 |
b = 133.047 | β = 90 |
c = 144.717 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
PHASER | phasing |