Catechol 2,3-dioxygenase with 3-fluorocatechol from Diaphorobacter sp DS2.
Mishra, K., Arya, C.K., Subramanian, R., Ramanathan, G.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Catechol 2,3-dioxygenase, extradiol protein | 314 | Diaphorobacter sp. DS2 | Mutation(s): 0  EC: 1.13.11.2 | ||
UniProt | |||||
Find proteins for A0A4V8GZK8 (Diaphorobacter sp. DS2) Explore A0A4V8GZK8  Go to UniProtKB:  A0A4V8GZK8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A4V8GZK8 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 5 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
3FA Query on 3FA | D [auth A] | 3-FLUOROBENZENE-1,2-DIOL C6 H5 F O2 DXOSJQLIRGXWCF-UHFFFAOYSA-N | |||
PEG Query on PEG | E [auth A] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | |||
EDO Query on EDO | F [auth A], G [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
FE Query on FE | C [auth A] | FE (III) ION Fe VTLYFUHAOXGGBS-UHFFFAOYSA-N | |||
CA Query on CA | B [auth A] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 102.281 | α = 90 |
b = 102.281 | β = 90 |
c = 113.851 | γ = 120 |
Software Name | Purpose |
---|---|
Aimless | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
XDS | data reduction |
PHENIX | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
India | BT/IN/SWEDEN/41/SR/2013 | |
India | BT/PR5081/INF/156/2012 | |
India | BT/PR12422/MED/31/287/214 | |
India | BT/INF/22/SP22660/2017 | |
India | 09/092(0869)/2013-EMR-I |