Porcine pepsin in complex with ritonavir
Vuksanovic, N., Silvaggi, N.R.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Pepsin A | 326 | Sus scrofa | Mutation(s): 0  EC: 3.4.23.1 | ||
UniProt | |||||
Find proteins for P00791 (Sus scrofa) Explore P00791  Go to UniProtKB:  P00791 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P00791 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
RIT (Subject of Investigation/LOI) Query on RIT | B [auth A] | RITONAVIR C37 H48 N6 O5 S2 NCDNCNXCDXHOMX-XGKFQTDJSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
SEP Query on SEP | A | L-PEPTIDE LINKING | C3 H8 N O6 P | SER |
Entity ID: 2 | |||||
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ID | Chains | Name | Type/Class | 2D Diagram | 3D Interactions |
PRD_001001 (RIT) Query on PRD_001001 | B [auth A] | RITONAVIR | Peptide-like / Inhibitor |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 66.16 | α = 90 |
b = 66.16 | β = 90 |
c = 285.522 | γ = 120 |
Software Name | Purpose |
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PHENIX | refinement |
PDB_EXTRACT | data extraction |
MOSFLM | data reduction |
SCALA | data scaling |
PHASER | phasing |