Experimental Data Snapshot
Starting Model: experimental
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(2022) Nat Catal 5: 332-341
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Uridine 5'-monophosphate synthase | 260 | Homo sapiens | Mutation(s): 0 Gene Names: UMPS, OK/SW-cl.21 EC: 2.4.2.10 (PDB Primary Data), 4.1.1.23 (PDB Primary Data) |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P11172 (Homo sapiens) Explore P11172 Go to UniProtKB: P11172 | |||||
PHAROS: P11172 GTEx: ENSG00000114491 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P11172 | ||||
Sequence AnnotationsExpand | |||||
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| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| BMP (Subject of Investigation/LOI) Query on BMP | B [auth A] | 6-HYDROXYURIDINE-5'-PHOSPHATE C9 H13 N2 O10 P UDOBICLZEKUKCV-YXZULKJRSA-N |  | ||
| PRO Query on PRO | C [auth A], D [auth A] | PROLINE C5 H9 N O2 ONIBWKKTOPOVIA-BYPYZUCNSA-N |  | ||
| Modified Residues 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| ALY Query on ALY | A | L-PEPTIDE LINKING | C8 H16 N2 O3 |  | LYS |
| CSS Query on CSS | A | L-PEPTIDE LINKING | C3 H7 N O2 S2 |  | CYS |
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 77.39 | α = 90 |
| b = 116.84 | β = 90 |
| c = 62.04 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| XDS | data reduction |
| XSCALE | data scaling |
| MOLREP | phasing |
| PDB_EXTRACT | data extraction |
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