Structure of the ternary complex of peptidoglycan recognition protein-short (PGRP-S)
Maurya, A., Viswanathan, V., Sharma, P., Sharma, S., Singh, T.P.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Peptidoglycan recognition protein 1 | 171 | Camelus dromedarius | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for Q9GK12 (Camelus dromedarius) Explore Q9GK12  Go to UniProtKB:  Q9GK12 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9GK12 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 5 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
TLA (Subject of Investigation/LOI) Query on TLA | E [auth A], L [auth D], O [auth D] | L(+)-TARTARIC ACID C4 H6 O6 FEWJPZIEWOKRBE-JCYAYHJZSA-N | |||
6NA (Subject of Investigation/LOI) Query on 6NA | H [auth C] | HEXANOIC ACID C6 H12 O2 FUZZWVXGSFPDMH-UHFFFAOYSA-N | |||
GOL (Subject of Investigation/LOI) Query on GOL | M [auth D], N [auth D] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
EDO (Subject of Investigation/LOI) Query on EDO | F [auth A], I [auth C], J [auth C], K [auth C] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
CL (Subject of Investigation/LOI) Query on CL | G [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
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a = 89.085 | α = 90 |
b = 101.355 | β = 90 |
c = 163.022 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data reduction |
XSCALE | data scaling |
MOLREP | phasing |