Structure of WSSV thymidylate synthase in complex with dUMP
Ma, Q., Liu, C., Zang, K.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Thymidylate synthase | 292 | Shrimp white spot syndrome virus (isolate Tongan) | Mutation(s): 0  EC: 2.1.1.45 | ||
UniProt | |||||
Find proteins for Q77J90 (White spot syndrome virus (isolate Shrimp/China/Tongan/1996)) Explore Q77J90  Go to UniProtKB:  Q77J90 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q77J90 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
UMP (Subject of Investigation/LOI) Query on UMP | E [auth A], H [auth B], J [auth C], Q [auth D] | 2'-DEOXYURIDINE 5'-MONOPHOSPHATE C9 H13 N2 O8 P JSRLJPSBLDHEIO-SHYZEUOFSA-N | |||
1PE Query on 1PE | F [auth A], I [auth B], K [auth C], R [auth D] | PENTAETHYLENE GLYCOL C10 H22 O6 JLFNLZLINWHATN-UHFFFAOYSA-N | |||
BTB Query on BTB | L [auth C], S [auth D] | 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL C8 H19 N O5 OWMVSZAMULFTJU-UHFFFAOYSA-N | |||
SO4 Query on SO4 | G [auth A], M [auth C], N [auth C], O [auth C], P [auth C] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 54.91 | α = 90 |
b = 132.35 | β = 90 |
c = 234.11 | γ = 90 |
Software Name | Purpose |
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BUSTER | refinement |
PDB_EXTRACT | data extraction |
XDS | data reduction |
Aimless | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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National Natural Science Foundation of China (NSFC) | China | -- |