Download MendeleyClostridium perfringens chitinase CP4_3455
Bloch, Y., Savvides, S.N.To be published.
8OTB
Clostridium perfringens chitinase CP4_3455
- PDB DOI: https://doi.org/10.2210/pdb8OTB/pdb
- Classification: HYDROLASE
- Organism(s): Clostridium perfringens
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2023-04-20 Released: 2023-07-12
- Funding Organization(s): Research Foundation - Flanders (FWO)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.50 Å
- R-Value Free: 0.175
- R-Value Work: 0.158
- R-Value Observed: 0.158
Starting Model: experimental
View more details
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Chitodextrinase | 575 | Clostridium perfringens | Mutation(s): 0 Gene Names: CP4_3455 |  | |
UniProt | |||||
Find proteins for F8UNI5 (Clostridium perfringens) Explore F8UNI5 Go to UniProtKB: F8UNI5 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | F8UNI5 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PEG Query on PEG | B [auth A], C [auth A] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N |  | ||
| CL Query on CL | D [auth A], E [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | ||
| NA Query on NA | F [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.50 Å
- R-Value Free: 0.175
- R-Value Work: 0.158
- R-Value Observed: 0.158
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 50.47 | α = 90 |
| b = 109.03 | β = 90 |
| c = 111.58 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| XDS | data reduction |
| XDS | data scaling |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2023-07-12 Deposition Author(s): Bloch, Y., Savvides, S.N.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Research Foundation - Flanders (FWO) | Belgium | 12S0519N |
Revision History (Full details and data files)
- Version 1.0: 2023-07-12
Type: Initial release - Version 1.1: 2024-06-19
Changes: Data collection
