1O84
Crystal Structure of Bacteriocin AS-48. N-decyl-beta-D-maltoside Bound.
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1o84a_ | All alpha proteins | Saposin-like | Bacteriocin AS-48 | Bacteriocin AS-48 | Bacteriocin AS-48 | (Enterococcus faecalis ) [TaxId: 1351 ], | SCOPe (2.08) |
B | d1o84b_ | All alpha proteins | Saposin-like | Bacteriocin AS-48 | Bacteriocin AS-48 | Bacteriocin AS-48 | (Enterococcus faecalis ) [TaxId: 1351 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Bacteriocin_IId | e1o84A1 | A: alpha arrays | X: Saposin-like | H: Bacteriocin AS-48-related (From Topology) | T: Bacteriocin AS-48-related | F: Bacteriocin_IId | ECOD (1.6) |
B | Bacteriocin_IId | e1o84B1 | A: alpha arrays | X: Saposin-like | H: Bacteriocin AS-48-related (From Topology) | T: Bacteriocin AS-48-related | F: Bacteriocin_IId | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.225.10 | Mainly Alpha | Up-down Bundle | Bacteriocin As-48 | Chain A | CATH (4.3.0) |
B | 1.20.225.10 | Mainly Alpha | Up-down Bundle | Bacteriocin As-48 | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09221 | Bacteriocin class IId cyclical uberolysin-like (Bacteriocin_IId) | Bacteriocin class IId cyclical uberolysin-like | Members of this family are membrane-interacting peptides, produced by Firmicutes that display a broad anti-microbial spectrum against Gram-positive and Gram-negative bacteria. They adopt a helical structure, with four or five alpha helices forming a ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009086 | Bacteriocin AS-48 | Homologous Superfamily | |
IPR020038 | Circular bacteriocin | Family |