1RD5
Crystal structure of Tryptophan synthase alpha chain homolog BX1: a member of the chemical plant defense system
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d1rd5b_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Ribulose-phoshate binding barrel | Tryptophan biosynthesis enzymes | Trp synthase alpha-subunit | (Zea mays ) [TaxId: 4577 ], | SCOPe (2.08) |
A | d1rd5a_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Ribulose-phoshate binding barrel | Tryptophan biosynthesis enzymes | Trp synthase alpha-subunit | (Zea mays ) [TaxId: 4577 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Ribulose-phoshate binding barrel | 8042223 | 3000216 | SCOP2B (2022-06-29) |
A | SCOP2 Family | Tryptophan biosynthesis enzymes | 8029844 | 4003071 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Ribulose-phoshate binding barrel | 8042223 | 3000216 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | Trp_syntA | e1rd5B1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Trp_syntA | ECOD (1.6) |
A | Trp_syntA | e1rd5A1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Trp_syntA | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
A | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00290 | Tryptophan synthase alpha chain (Trp_syntA) | Tryptophan synthase alpha chain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002028 | Tryptophan synthase, alpha chain | Family | |
IPR011060 | Ribulose-phosphate binding barrel | Homologous Superfamily | |
IPR018204 | Tryptophan synthase, alpha chain, active site | Active Site | |
IPR013785 | Aldolase-type TIM barrel | Homologous Superfamily |