2GZK
Structure of a complex of tandem HMG boxes and DNA
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | d2gzka1 | All alpha proteins | HMG-box | HMG-box | HMG-box | High mobility group protein 1, HMG1 | human (Homo sapiens ) [TaxId: 9606 ], black rat (Rattus rattus ) [TaxId: 10117 ], | SCOPe (2.08) |
C [auth A] | d2gzka2 | All alpha proteins | HMG-box | HMG-box | HMG-box | SRY | human (Homo sapiens ) [TaxId: 9606 ], black rat (Rattus rattus ) [TaxId: 10117 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth A] | SCOP2B Superfamily | HMG-box | 8036768 | 3001368 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | HMG_box | e2gzkA1 | A: alpha arrays | X: HMG-box (From Topology) | H: HMG-box (From Topology) | T: HMG-box | F: HMG_box | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C [auth A] | 1.10.30.10 | Mainly Alpha | Orthogonal Bundle | DNA Binding (I), subunit A | High mobility group box domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A] | PF00505 | HMG (high mobility group) box (HMG_box) | HMG (high mobility group) box | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A] | IPR036910 | High mobility group box domain superfamily | Homologous Superfamily |
C [auth A] | IPR050342 | High Mobility Group Box (HMGB) | Family |
C [auth A] | IPR017967 | HMG box A DNA-binding domain, conserved site | Conserved Site |
C [auth A] | IPR009071 | High mobility group box domain | Domain |
C [auth A] | IPR050140 | SRY-related HMG-box transcription factor-like | Family |
C [auth A] | IPR017253 | Transcription factor SRY | Family |
C [auth A] | IPR009071 | High mobility group box domain | Domain |
C [auth A] | IPR036910 | High mobility group box domain superfamily | Homologous Superfamily |