3C6P
Small molecule agonists and antagonists of F-box protein-substrate interactions in auxin perception and signaling
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3c6pa2 | All alpha proteins | Skp1 dimerisation domain-like | Skp1 dimerisation domain-like | automated matches | automated matches | thale cress (Arabidopsis thaliana ) [TaxId: 3702 ], | SCOPe (2.08) |
A | d3c6pa1 | Alpha and beta proteins (a+b) | POZ domain | POZ domain | automated matches | automated matches | thale cress (Arabidopsis thaliana ) [TaxId: 3702 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | LRR_8_4 | e3c6pB3 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: LRR_8_4 | ECOD (1.6) |
B | F-box-like_3 | e3c6pB4 | A: alpha arrays | X: F-box domain (From Topology) | H: F-box domain (From Topology) | T: F-box domain | F: F-box-like_3 | ECOD (1.6) |
A | Skp1_POZ | e3c6pA1 | A: a+b two layers | X: POZ domain (From Topology) | H: POZ domain (From Topology) | T: POZ domain | F: Skp1_POZ | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 1.20.1280.50 | Mainly Alpha | Up-down Bundle | Monooxygenase | CATH (4.3.0) | |
B | 3.80.10.10 | Alpha Beta | Alpha-Beta Horseshoe | Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) | Ribonuclease Inhibitor | CATH (4.3.0) |
A | 3.30.710.10 | Alpha Beta | 2-Layer Sandwich | Potassium Channel Kv1.1 | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF18791 | Transport inhibitor response 1 protein domain (Transp_inhibit) | Transport inhibitor response 1 protein domain | - | Repeat | |
PF01466 | Skp1 family, dimerisation domain (Skp1) | Skp1 family, dimerisation domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036047 | F-box-like domain superfamily | Homologous Superfamily | |
IPR041567 | COI1, F-box | Domain | |
IPR001810 | F-box domain | Domain | |
IPR032675 | Leucine-rich repeat domain superfamily | Homologous Superfamily | |
IPR006553 | Leucine-rich repeat, cysteine-containing subtype | Repeat | |
IPR041101 | Transport inhibitor response 1 domain | Domain | |
IPR016073 | SKP1 component, POZ domain | Domain | |
IPR036296 | SKP1-like, dimerisation domain superfamily | Homologous Superfamily | |
IPR001232 | S-phase kinase-associated protein 1-like | Family | |
IPR016072 | SKP1 component, dimerisation | Domain | |
IPR011333 | SKP1/BTB/POZ domain superfamily | Homologous Superfamily | |
IPR016897 | S-phase kinase-associated protein 1 | Family |