3KC6
Crystal structure of the large c-terminal domain of polymerase basic protein 2 from influenza virus a/viet nam/1203/2004 (h5n1)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3kc6a2 | Alpha and beta proteins (a+b) | PB2 C-terminal domain-like | PB2 C-terminal domain-like | PB2 C-terminal domain-like | Polymerase basic protein 2, PB2 | A/Viet Nam/1203/2004(H5N1) (Influenza A virus (A/Viet Nam/1203/2004(H5N1)) ) [TaxId: 284218 ], | SCOPe (2.08) |
A | d3kc6a1 | Alpha and beta proteins (a+b) | Influenza virus PB2 '627' domain-like | Influenza virus PB2 '627' domain-like | Influenza virus PB2 '627' domain | Polymerase basic protein 2, PB2 | A/Viet Nam/1203/2004(H5N1) (Influenza A virus (A/Viet Nam/1203/2004(H5N1)) ) [TaxId: 284218 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Flu_PB2_6th | e3kc6A2 | A: alpha arrays | X: PB2 '627' domain-related (From Homology) | H: PB2 '627' domain-related | T: Polymerase basic protein 2 (PB2) '627' domain | F: Flu_PB2_6th | ECOD (1.6) |
A | Flu_PB2_7th | e3kc6A1 | A: a+b two layers | X: PB2 C-terminal domain-like (From Topology) | H: PB2 C-terminal domain-like (From Topology) | T: PB2 C-terminal domain-like | F: Flu_PB2_7th | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.30.90 | Alpha Beta | 2-Layer Sandwich | Defensin A-like | Polymerase Basic Protein 2, C-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF20952 | Influenza RNA polymerase PB2 C-terminal domain (Flu_PB2_7th) | Influenza RNA polymerase PB2 C-terminal domain | Influenza virus encodes a large, multidomain RNA-dependent RNA polymerase that can both transcribe and replicate the viral RNA genome. In influenza virus, the polymerase is composed of three polypeptides: PB1, PB2 and PA/P3. PB1 houses the polymerase ... | Domain |