Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd3pz2b_ All alpha proteins alpha/alpha toroid Terpenoid cyclases/Protein prenyltransferases Protein prenyltransferases Rab geranylgeranyltransferase, beta subunit rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyProtein prenylyltransferase 8038637 3001312 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyProtein prenylyltransferase 8038637 3001312 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTerpenoid cyclases/Protein prenyltransferases 8040875 3001024 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APPTAe3pz2A1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PPTAECOD (1.6)
BSQHop_cyclase_Ce3pz2B1 A: alpha superhelicesX: Repetitive alpha hairpinsH: alpha/alpha toroid (From Topology)T: alpha/alpha toroidF: SQHop_cyclase_CECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.25.40.120 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat Protein prenylyltransferaseCATH (4.3.0)
B1.50.10.20 Mainly Alpha Alpha/alpha barrel Glycosyltransferase CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF01239Protein prenyltransferase alpha subunit repeat (PPTA)Protein prenyltransferase alpha subunit repeat- Repeat
PF00432Prenyltransferase and squalene oxidase repeat (Prenyltrans)Prenyltransferase and squalene oxidase repeat- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Geranylgeranyl transferase type-2 subunit alpha
Geranylgeranyl transferase type-2 subunit beta