3WQL
Crystal structure of Rv3378c with Mg2+ and PPi
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | Prenyltransf_like | e3wqlB1 | A: a/b three-layered sandwiches | X: Undecaprenyl diphosphate synthase (From Topology) | H: Undecaprenyl diphosphate synthase (From Topology) | T: Undecaprenyl diphosphate synthase | F: Prenyltransf_like | ECOD (1.6) |
A | Prenyltransf_like | e3wqlA1 | A: a/b three-layered sandwiches | X: Undecaprenyl diphosphate synthase (From Topology) | H: Undecaprenyl diphosphate synthase (From Topology) | T: Undecaprenyl diphosphate synthase | F: Prenyltransf_like | ECOD (1.6) |
C | Prenyltransf_like | e3wqlC1 | A: a/b three-layered sandwiches | X: Undecaprenyl diphosphate synthase (From Topology) | H: Undecaprenyl diphosphate synthase (From Topology) | T: Undecaprenyl diphosphate synthase | F: Prenyltransf_like | ECOD (1.6) |
D | Prenyltransf_like | e3wqlD1 | A: a/b three-layered sandwiches | X: Undecaprenyl diphosphate synthase (From Topology) | H: Undecaprenyl diphosphate synthase (From Topology) | T: Undecaprenyl diphosphate synthase | F: Prenyltransf_like | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.40.1180.10 | Alpha Beta | 3-Layer(aba) Sandwich | Undecaprenyl pyrophosphate synthetase | Decaprenyl diphosphate synthase-like | CATH (4.3.0) |
A | 3.40.1180.10 | Alpha Beta | 3-Layer(aba) Sandwich | Undecaprenyl pyrophosphate synthetase | Decaprenyl diphosphate synthase-like | CATH (4.3.0) |
C | 3.40.1180.10 | Alpha Beta | 3-Layer(aba) Sandwich | Undecaprenyl pyrophosphate synthetase | Decaprenyl diphosphate synthase-like | CATH (4.3.0) |
D | 3.40.1180.10 | Alpha Beta | 3-Layer(aba) Sandwich | Undecaprenyl pyrophosphate synthetase | Decaprenyl diphosphate synthase-like | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage
Chains | Enzyme Name | Description | Catalytic Residues |
---|---|---|---|
isotuberculosinol synthase M-CSA #954 | This enzyme is responsible for the conversion of tuberculosinyl diphosphate to tuberculosinol and the R and S iso-tuberculosinols. Tuberculosinols are one class of virulence factor in Mycobacterium tuberculosis. The active site for both of these functions is the same, but the R- and S-iso-tuberculosinol formation involves the addition of water at the C13 atom, rather than the C15, and involve an allylic rearrangement. | EC: 3.1.7.9 (PDB Primary Data) EC: 3.1.7.8 (PDB Primary Data) EC: 2.5.1.153 (UniProt) | |
tuberculosinol synthase M-CSA #955 | This enzyme is responsible for the conversion of tuberculosinyl diphosphate to tuberculosinol and the R and S iso-tuberculosinols. Tuberculosinols are one class of virulence factor in Mycobacterium tuberculosis. The active site for both of these functions is the same, but the R- and S-iso-tuberculosinol formation involves the addition of water at the C13 atom, rather than the C15, and involve an allylic rearrangement. | EC: 3.1.7.9 (PDB Primary Data) EC: 3.1.7.8 (PDB Primary Data) EC: 2.5.1.153 (UniProt) |