Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad4cqva1 All beta proteins Viral protein domain Viral protein domain Influenza hemagglutinin headpiece automated matches (Influenza A virus (A/turkey/Turkey/1/2005(H5N1)) ) [TaxId: 375457 ], SCOPe (2.08)
Ad4cqva2 Artifacts Tags Tags Tags N-terminal Tags (Influenza A virus (A/turkey/Turkey/1/2005(H5N1)) ) [TaxId: 375457 ], SCOPe (2.08)
Cd4cqvc1 All beta proteins Viral protein domain Viral protein domain Influenza hemagglutinin headpiece automated matches (Influenza A virus (A/turkey/Turkey/1/2005(H5N1)) ) [TaxId: 375457 ], SCOPe (2.08)
Cd4cqvc2 Artifacts Tags Tags Tags N-terminal Tags (Influenza A virus (A/turkey/Turkey/1/2005(H5N1)) ) [TaxId: 375457 ], SCOPe (2.08)
Ed4cqve1 All beta proteins Viral protein domain Viral protein domain Influenza hemagglutinin headpiece automated matches (Influenza A virus (A/turkey/Turkey/1/2005(H5N1)) ) [TaxId: 375457 ], SCOPe (2.08)
Ed4cqve2 Artifacts Tags Tags Tags N-terminal Tags (Influenza A virus (A/turkey/Turkey/1/2005(H5N1)) ) [TaxId: 375457 ], SCOPe (2.08)
Bd4cqvb_ Coiled coil proteins Stalk segment of viral fusion proteins Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) automated matches (Influenza A virus (A/turkey/Turkey/1/2005(H5N1)) ) [TaxId: 375457 ], SCOPe (2.08)
Dd4cqvd_ Coiled coil proteins Stalk segment of viral fusion proteins Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) automated matches (Influenza A virus (A/turkey/Turkey/1/2005(H5N1)) ) [TaxId: 375457 ], SCOPe (2.08)
Fd4cqvf_ Coiled coil proteins Stalk segment of viral fusion proteins Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) automated matches (Influenza A virus (A/turkey/Turkey/1/2005(H5N1)) ) [TaxId: 375457 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyInfluenza hemagglutinin headpiece 8087773 4002506 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyInfluenza hemagglutinin domain-like 8087774 3001342 SCOP2 (2022-06-29)
CSCOP2B SuperfamilyInfluenza hemagglutinin domain-like 8087774 3001342 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyInfluenza hemagglutinin domain-like 8087774 3001342 SCOP2B (2022-06-29)
BSCOP2 FamilyInfluenza hemagglutinin (stalk) 8087943 4003840 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyInfluenza hemagglutinin (stalk) 8087944 3001616 SCOP2 (2022-06-29)
DSCOP2B SuperfamilyInfluenza hemagglutinin (stalk) 8087944 3001616 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyInfluenza hemagglutinin (stalk) 8087944 3001616 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AHemagglutinin_1ste4cqvA1 A: beta sandwichesX: jelly-rollH: Viral protein domain (From Topology)T: Viral protein domainF: Hemagglutinin_1stECOD (1.6)
CHemagglutinin_1ste4cqvC1 A: beta sandwichesX: jelly-rollH: Viral protein domain (From Topology)T: Viral protein domainF: Hemagglutinin_1stECOD (1.6)
EHemagglutinin_1ste4cqvE1 A: beta sandwichesX: jelly-rollH: Viral protein domain (From Topology)T: Viral protein domainF: Hemagglutinin_1stECOD (1.6)
BHemagglutinin_2nde4cqvB1 A: alpha bundlesX: Hemagglutinin HA2 chain (From Topology)H: Hemagglutinin HA2 chain (From Topology)T: Hemagglutinin HA2 chainF: Hemagglutinin_2ndECOD (1.6)
DHemagglutinin_2nde4cqvD1 A: alpha bundlesX: Hemagglutinin HA2 chain (From Topology)H: Hemagglutinin HA2 chain (From Topology)T: Hemagglutinin HA2 chainF: Hemagglutinin_2ndECOD (1.6)
FHemagglutinin_2nde4cqvF1 A: alpha bundlesX: Hemagglutinin HA2 chain (From Topology)H: Hemagglutinin HA2 chain (From Topology)T: Hemagglutinin HA2 chainF: Hemagglutinin_2ndECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C, E
PF00509Haemagglutinin (Hemagglutinin)Haemagglutinin- Family
B, D, F
PF00509Haemagglutinin (Hemagglutinin)Haemagglutinin- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C, E
HAEMAGGLUTININ HA1
B, D, F
HAEMAGGLUTININ HA2