Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AGP120_3rde4jzwA2 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: GP120_3rdECOD (1.6)
AGP120_1ste4jzwA1 A: a+b two layersX: gp120 inner domain (From Topology)H: gp120 inner domain (From Topology)T: gp120 inner domainF: GP120_1stECOD (1.6)
B [auth G]GP120_3rde4jzwG2 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: GP120_3rdECOD (1.6)
B [auth G]GP120_1ste4jzwG1 A: a+b two layersX: gp120 inner domain (From Topology)H: gp120 inner domain (From Topology)T: gp120 inner domainF: GP120_1stECOD (1.6)
C [auth M]Toxin_2_like_1e4jzwM1 A: few secondary structure elementsX: omega toxin-likeH: omega toxin-relatedT: Scorpion toxin-likeF: Toxin_2_like_1ECOD (1.6)
D [auth R]Toxin_2_like_1e4jzwR1 A: few secondary structure elementsX: omega toxin-likeH: omega toxin-relatedT: Scorpion toxin-likeF: Toxin_2_like_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.170.40.20 Mainly Beta Beta Complex HIV Envelope Protein Gp120 Chain GCATH (4.3.0)
B [auth G]2.170.40.20 Mainly Beta Beta Complex HIV Envelope Protein Gp120 Chain GCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
B [auth G]
HIV-1 YU2 gp120 glycoprotein
C [auth M],
D [auth R]
CD4-MIMETIC MINIPROTEIN M48U1---

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
C [auth M],
D [auth R]
DPR
C [auth M],
D [auth R]
MPT
C [auth M],
D [auth R]
NH2 RESIDAA0081 , AA0083 , AA0084 , AA0086 , AA0087 , AA0088 , AA0090 , AA0091 , AA0092 , AA0093 , AA0095 , AA0096 , AA0097 , AA0098 , AA0099 , AA0100

PSI-MOD :  L-alanine amide MOD:00090 , L-asparagine amide MOD:00092 , L-aspartic acid 1-amide MOD:00093 , L-glutamine amide MOD:00095 , L-glutamic acid 1-amide MOD:00096 , glycine amide MOD:00097 , L-isoleucine amide MOD:00099 , L-leucine amide MOD:00100 , L-lysine amide MOD:00101 , L-methionine amide MOD:00102 , L-proline amide MOD:00104 , L-serine amide MOD:00105 , L-threonine amide MOD:00106 , L-tryptophan amide MOD:00107 , L-tyrosine amide MOD:00108 , L-valine amide MOD:00109
C [auth M],
D [auth R]
U2X Parent Component: TYR

RESIDAA0081 , AA0083 , AA0084 , AA0086 , AA0087 , AA0088 , AA0090 , AA0091 , AA0092 , AA0093 , AA0095 , AA0096 , AA0097 , AA0098 , AA0099 , AA0100