Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad4ml8a2 Alpha and beta proteins (a+b) Ferredoxin-like FAD-linked oxidases, C-terminal domain automated matches automated matches maize (Zea mays ) [TaxId: 4577 ], SCOPe (2.08)
Ad4ml8a1 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like automated matches automated matches maize (Zea mays ) [TaxId: 4577 ], SCOPe (2.08)
Bd4ml8b2 Alpha and beta proteins (a+b) Ferredoxin-like FAD-linked oxidases, C-terminal domain automated matches automated matches maize (Zea mays ) [TaxId: 4577 ], SCOPe (2.08)
Bd4ml8b1 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like automated matches automated matches maize (Zea mays ) [TaxId: 4577 ], SCOPe (2.08)
Cd4ml8c2 Alpha and beta proteins (a+b) Ferredoxin-like FAD-linked oxidases, C-terminal domain automated matches automated matches maize (Zea mays ) [TaxId: 4577 ], SCOPe (2.08)
Cd4ml8c1 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like automated matches automated matches maize (Zea mays ) [TaxId: 4577 ], SCOPe (2.08)
Dd4ml8d2 Alpha and beta proteins (a+b) Ferredoxin-like FAD-linked oxidases, C-terminal domain automated matches automated matches maize (Zea mays ) [TaxId: 4577 ], SCOPe (2.08)
Dd4ml8d1 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like automated matches automated matches maize (Zea mays ) [TaxId: 4577 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ACytokin-binde4ml8A1 A: a+b two layersX: Alpha-beta plaitsH: FAD-linked oxidases, C-terminal domain (From Topology)T: FAD-linked oxidases, C-terminal domainF: Cytokin-bindECOD (1.6)
AFAD_binding_4e4ml8A2 A: a+b complex topologyX: FAD-binding domain-likeH: FAD-binding domain (From Topology)T: FAD-binding domainF: FAD_binding_4ECOD (1.6)
BCytokin-binde4ml8B1 A: a+b two layersX: Alpha-beta plaitsH: FAD-linked oxidases, C-terminal domain (From Topology)T: FAD-linked oxidases, C-terminal domainF: Cytokin-bindECOD (1.6)
BFAD_binding_4e4ml8B2 A: a+b complex topologyX: FAD-binding domain-likeH: FAD-binding domain (From Topology)T: FAD-binding domainF: FAD_binding_4ECOD (1.6)
CCytokin-binde4ml8C1 A: a+b two layersX: Alpha-beta plaitsH: FAD-linked oxidases, C-terminal domain (From Topology)T: FAD-linked oxidases, C-terminal domainF: Cytokin-bindECOD (1.6)
CFAD_binding_4e4ml8C2 A: a+b complex topologyX: FAD-binding domain-likeH: FAD-binding domain (From Topology)T: FAD-binding domainF: FAD_binding_4ECOD (1.6)
DCytokin-binde4ml8D1 A: a+b two layersX: Alpha-beta plaitsH: FAD-linked oxidases, C-terminal domain (From Topology)T: FAD-linked oxidases, C-terminal domainF: Cytokin-bindECOD (1.6)
DFAD_binding_4e4ml8D2 A: a+b complex topologyX: FAD-binding domain-likeH: FAD-binding domain (From Topology)T: FAD-binding domainF: FAD_binding_4ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF09265Cytokinin dehydrogenase 1, FAD and cytokinin binding (Cytokin-bind)Cytokinin dehydrogenase 1, FAD and cytokinin bindingMembers of this family adopt an alpha+beta sandwich structure with an antiparallel beta-sheet, in a ferredoxin-like fold. They are predominantly found in plant cytokinin dehydrogenase 1, where they are capable of binding both FAD and cytokinin substr ...Members of this family adopt an alpha+beta sandwich structure with an antiparallel beta-sheet, in a ferredoxin-like fold. They are predominantly found in plant cytokinin dehydrogenase 1, where they are capable of binding both FAD and cytokinin substrates. The substrate displays a 'plug-into-socket' binding mode that seals the catalytic site and precisely positions the carbon atom undergoing oxidation in close contact with the reactive locus of the flavin [1].
Domain
A, B, C, D
PF01565FAD binding domain (FAD_binding_4)FAD binding domainThis family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, call ...This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110 [1]. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyses the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyses the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidises the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan [2].
Domain