4P9D
Crystal structure of dCMP deaminase from the cyanophage S-TIM5 in complex with dTMP and dTTP.
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Cytidine deaminase-like | 8077747 | 3001838 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Cytidine deaminase-like | 8077747 | 3001838 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Cytidine deaminase-like | 8077747 | 3001838 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Cytidine deaminase-like | 8077747 | 3001838 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Cytidine deaminase-like | 8077747 | 3001838 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Cytidine deaminase-like | 8077747 | 3001838 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | dCMP_cyt_deam_1 | e4p9dA1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: dCMP_cyt_deam_1 | ECOD (1.6) |
B | dCMP_cyt_deam_1 | e4p9dB1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: dCMP_cyt_deam_1 | ECOD (1.6) |
C | dCMP_cyt_deam_1 | e4p9dC1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: dCMP_cyt_deam_1 | ECOD (1.6) |
D | dCMP_cyt_deam_1 | e4p9dD1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: dCMP_cyt_deam_1 | ECOD (1.6) |
E | dCMP_cyt_deam_1 | e4p9dE1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: dCMP_cyt_deam_1 | ECOD (1.6) |
F | dCMP_cyt_deam_1 | e4p9dF1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: dCMP_cyt_deam_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.140.10 | Alpha Beta | 3-Layer(aba) Sandwich | Cytidine Deaminase | domain 2 | CATH (4.3.0) |
B | 3.40.140.10 | Alpha Beta | 3-Layer(aba) Sandwich | Cytidine Deaminase | domain 2 | CATH (4.3.0) |
C | 3.40.140.10 | Alpha Beta | 3-Layer(aba) Sandwich | Cytidine Deaminase | domain 2 | CATH (4.3.0) |
D | 3.40.140.10 | Alpha Beta | 3-Layer(aba) Sandwich | Cytidine Deaminase | domain 2 | CATH (4.3.0) |
E | 3.40.140.10 | Alpha Beta | 3-Layer(aba) Sandwich | Cytidine Deaminase | domain 2 | CATH (4.3.0) |
F | 3.40.140.10 | Alpha Beta | 3-Layer(aba) Sandwich | Cytidine Deaminase | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR016473 | Deoxycytidylate deaminase | Family | |
IPR015517 | Deoxycytidylate deaminase-related | Family | |
IPR002125 | Cytidine and deoxycytidylate deaminase domain | Domain | |
IPR016192 | APOBEC/CMP deaminase, zinc-binding | Binding Site | |
IPR016193 | Cytidine deaminase-like | Homologous Superfamily |