5U9E
Structure of the Regulatory Domain of the AraC Family Transcriptional Activator RhaR
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Cupin_2 | e5u9eA1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: Cupin_2 | ECOD (1.6) |
B | Cupin_2 | e5u9eB1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: Cupin_2 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02311 | AraC-like ligand binding domain (AraC_binding) | AraC-like ligand binding domain | This family represents the arabinose-binding and dimerisation domain of the bacterial gene regulatory protein AraC. The domain is found in conjunction with the helix-turn-helix (HTH) DNA-binding motif Pfam:PF00165. This domain is distantly related ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR023699 | Transcription activator HTH, RhaR | Family | |
IPR009057 | Homedomain-like superfamily | Homologous Superfamily | |
IPR050204 | AraC/XylS family transcriptional regulators | Family | |
IPR003313 | AraC-type arabinose-binding/dimerisation domain | Domain | |
IPR018060 | DNA binding HTH domain, AraC-type | Domain | |
IPR018062 | HTH domain AraC-type, conserved site | Conserved Site | |
IPR020449 | Transcription regulator HTH, AraC- type, HTH domain | Domain | |
IPR014710 | RmlC-like jelly roll fold | Homologous Superfamily | |
IPR047220 | HTH-type transcriptional activator RhaR/RhaS, N-terminal domain | Domain | |
IPR011051 | RmlC-like cupin domain superfamily | Homologous Superfamily |