Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad5w08a_ All beta proteins Viral protein domain Viral protein domain Influenza hemagglutinin headpiece automated matches (Influenza A virus (A/Texas/50/2012(H3N2)) ) [TaxId: 1321009 ], SCOPe (2.08)
Bd5w08b_ All beta proteins Viral protein domain Viral protein domain Influenza hemagglutinin headpiece automated matches (Influenza A virus (A/Texas/50/2012(H3N2)) ) [TaxId: 1321009 ], SCOPe (2.08)
Cd5w08c_ All beta proteins Viral protein domain Viral protein domain Influenza hemagglutinin headpiece automated matches (Influenza A virus (A/Texas/50/2012(H3N2)) ) [TaxId: 1321009 ], SCOPe (2.08)
Dd5w08d_ All beta proteins Viral protein domain Viral protein domain Influenza hemagglutinin headpiece automated matches (Influenza A virus (A/Texas/50/2012(H3N2)) ) [TaxId: 1321009 ], SCOPe (2.08)
Fd5w08f_ All beta proteins Viral protein domain Viral protein domain Influenza hemagglutinin headpiece automated matches (Influenza A virus (A/Texas/50/2012(H3N2)) ) [TaxId: 1321009 ], SCOPe (2.08)
Ed5w08e_ All beta proteins Viral protein domain Viral protein domain Influenza hemagglutinin headpiece automated matches (Influenza A virus (A/Texas/50/2012(H3N2)) ) [TaxId: 1321009 ], SCOPe (2.08)
Gd5w08g_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Id5w08i_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Kd5w08k_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Md5w08m_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Od5w08o_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Qd5w08q_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Hd5w08h2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Hd5w08h1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Jd5w08j2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Jd5w08j1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ld5w08l2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ld5w08l1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Nd5w08n2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Nd5w08n1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Pd5w08p2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Pd5w08p1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Rd5w08r2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Rd5w08r1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyInfluenza hemagglutinin domain-like 8087886 3001342 SCOP2B (2022-06-29)
BSCOP2 FamilyInfluenza hemagglutinin headpiece 8087885 4002506 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyInfluenza hemagglutinin domain-like 8087886 3001342 SCOP2 (2022-06-29)
CSCOP2B SuperfamilyInfluenza hemagglutinin domain-like 8087886 3001342 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyInfluenza hemagglutinin domain-like 8087886 3001342 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyInfluenza hemagglutinin domain-like 8087886 3001342 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyInfluenza hemagglutinin domain-like 8087886 3001342 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AHemagglutinin_1ste5w08A1 A: beta sandwichesX: jelly-rollH: Viral protein domain (From Topology)T: Viral protein domainF: Hemagglutinin_1stECOD (1.6)
BHemagglutinin_1ste5w08B1 A: beta sandwichesX: jelly-rollH: Viral protein domain (From Topology)T: Viral protein domainF: Hemagglutinin_1stECOD (1.6)
CHemagglutinin_1ste5w08C1 A: beta sandwichesX: jelly-rollH: Viral protein domain (From Topology)T: Viral protein domainF: Hemagglutinin_1stECOD (1.6)
DHemagglutinin_1ste5w08D1 A: beta sandwichesX: jelly-rollH: Viral protein domain (From Topology)T: Viral protein domainF: Hemagglutinin_1stECOD (1.6)
FHemagglutinin_1ste5w08F1 A: beta sandwichesX: jelly-rollH: Viral protein domain (From Topology)T: Viral protein domainF: Hemagglutinin_1stECOD (1.6)
EHemagglutinin_1ste5w08E1 A: beta sandwichesX: jelly-rollH: Viral protein domain (From Topology)T: Viral protein domainF: Hemagglutinin_1stECOD (1.6)
GV-set_8e5w08G2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_8ECOD (1.6)
GC1-set_1e5w08G1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)
IV-set_8e5w08I2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_8ECOD (1.6)
IC1-set_1e5w08I1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)
KV-set_8e5w08K1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_8ECOD (1.6)
KC1-set_1e5w08K2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)
MV-set_8e5w08M2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_8ECOD (1.6)
MC1-set_1e5w08M1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)
OV-set_8e5w08O1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_8ECOD (1.6)
OC1-set_1e5w08O2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)
QV-set_8e5w08Q2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_8ECOD (1.6)
QC1-set_1e5w08Q1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)
HC1-sete5w08H2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-setECOD (1.6)
HV-set_3e5w08H1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_3ECOD (1.6)
JC1-sete5w08J1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-setECOD (1.6)
JV-set_3e5w08J2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_3ECOD (1.6)
LC1-sete5w08L1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-setECOD (1.6)
LV-set_3e5w08L2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_3ECOD (1.6)
NC1-sete5w08N1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-setECOD (1.6)
NV-set_3e5w08N2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_3ECOD (1.6)
PC1-sete5w08P1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-setECOD (1.6)
PV-set_3e5w08P2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_3ECOD (1.6)
RC1-sete5w08R2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-setECOD (1.6)
RV-set_3e5w08R1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_3ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.10.77.10 Mainly Beta Ribbon Hemagglutinin Chain A, domain 2CATH (4.3.0)
A3.90.209.20 Alpha Beta Alpha-Beta Complex Hemagglutinin (Ha1 Chain) Chain: ACATH (4.3.0)
B2.10.77.10 Mainly Beta Ribbon Hemagglutinin Chain A, domain 2CATH (4.3.0)
B3.90.209.20 Alpha Beta Alpha-Beta Complex Hemagglutinin (Ha1 Chain) Chain: ACATH (4.3.0)
C2.10.77.10 Mainly Beta Ribbon Hemagglutinin Chain A, domain 2CATH (4.3.0)
C3.90.209.20 Alpha Beta Alpha-Beta Complex Hemagglutinin (Ha1 Chain) Chain: ACATH (4.3.0)
D2.10.77.10 Mainly Beta Ribbon Hemagglutinin Chain A, domain 2CATH (4.3.0)
D3.90.209.20 Alpha Beta Alpha-Beta Complex Hemagglutinin (Ha1 Chain) Chain: ACATH (4.3.0)
F2.10.77.10 Mainly Beta Ribbon Hemagglutinin Chain A, domain 2CATH (4.3.0)
F3.90.209.20 Alpha Beta Alpha-Beta Complex Hemagglutinin (Ha1 Chain) Chain: ACATH (4.3.0)
E2.10.77.10 Mainly Beta Ribbon Hemagglutinin Chain A, domain 2CATH (4.3.0)
E3.90.209.20 Alpha Beta Alpha-Beta Complex Hemagglutinin (Ha1 Chain) Chain: ACATH (4.3.0)
G2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
I2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
K2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
M2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
O2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
Q2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
H2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
J2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
L2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
N2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
P2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
R2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
G, I, K, M, O
Fab K03.12 VH-CH1 Homo sapiens (human) IGHV1-2*02, IGHJ6*01, IGHG1*03 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-1_LAMBDA IMGT (202444-0)
H, J, L, N, P
Fab K03.12 L-LAMBDA Homo sapiens (human) IGLV2-23*01, IGLJ2*01, IGLJ3*01, IGLC2*01, IGLC2*02, IGLC3*04 V-DOMAIN V-LAMBDA, C-DOMAIN C-LAMBDA IG FAB-GAMMA-1_LAMBDA IMGT (202444-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
G, I, K, M, O
Heavy ChainIGHV1 -hemagglutinin ha1SAbDab (2024-11-08)
H, J, L, N, P
Light ChainIGLV2 Lambdahemagglutinin ha1SAbDab (2024-11-08)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
G, I, K, M, O
PF07686Immunoglobulin V-set domain (V-set)Immunoglobulin V-set domainThis domain is found in antibodies as well as neural protein P0 and CTL4 amongst others.Domain
G, I, K, M, O
PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domain- Domain
H, J, L, N, P
PF07686Immunoglobulin V-set domain (V-set)Immunoglobulin V-set domainThis domain is found in antibodies as well as neural protein P0 and CTL4 amongst others.Domain
H, J, L, N, P
PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Hemagglutinin HA1
G, I, K, M, O
K03.12 antibody heavy chain
H, J, L, N, P
K03.12 antibody light chain- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR001364Haemagglutinin, influenzavirus A/BFamily
A, B, C, D, E
IPR008980Viral capsid/haemagglutinin proteinHomologous Superfamily
A, B, C, D, E
IPR000149Haemagglutinin, influenzavirus AFamily
A, B, C, D, E
IPR013828Haemagglutinin, HA1 chain, alpha/beta domain superfamilyHomologous Superfamily
G, I, K, M, O
IPR050199Immunoglobulin Heavy VariableFamily
G, I, K, M, O
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
G, I, K, M, O
IPR003597Immunoglobulin C1-setDomain
G, I, K, M, O
IPR013783Immunoglobulin-like foldHomologous Superfamily
G, I, K, M, O
IPR013106Immunoglobulin V-set domainDomain
G, I, K, M, O
IPR003599Immunoglobulin domain subtypeDomain
G, I, K, M, O
IPR007110Immunoglobulin-like domainDomain
G, I, K, M, O
IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
H, J, L, N, P
IPR003597Immunoglobulin C1-setDomain
H, J, L, N, P
IPR013783Immunoglobulin-like foldHomologous Superfamily
H, J, L, N, P
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
H, J, L, N, P
IPR013106Immunoglobulin V-set domainDomain
H, J, L, N, P
IPR003599Immunoglobulin domain subtypeDomain
H, J, L, N, P
IPR007110Immunoglobulin-like domainDomain
H, J, L, N, P
IPR050160Major Histocompatibility Complex/ImmunoglobulinFamily
H, J, L, N, P
IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site