Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
A [auth C]d5y5sc_ All alpha proteins Multiheme cytochromes Multiheme cytochromes Photosynthetic reaction centre (cytochrome subunit) automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
C [auth M]d5y5sm_ Membrane and cell surface proteins and peptides Bacterial photosystem II reaction centre, L and M subunits Bacterial photosystem II reaction centre, L and M subunits Bacterial photosystem II reaction centre, L and M subunits automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
D [auth H]d5y5sh2 All beta proteins PRC-barrel domain PRC-barrel domain Photosynthetic reaction centre, H-chain, cytoplasmic domain automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
D [auth H]d5y5sh1 Membrane and cell surface proteins and peptides Single transmembrane helix Photosystem II reaction centre subunit H, transmembrane region automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
AA [auth 1]d5y5s1_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
E [auth A]d5y5sa_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
EA [auth 5]d5y5s5_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
IA [auth 9]d5y5s9_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
K [auth I]d5y5si_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
Od5y5so_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
Qd5y5sq_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
Ud5y5su_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
Wd5y5sw_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
CA [auth 3]d5y5s3_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
G [auth D]d5y5sd_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
GA [auth 7]d5y5s7_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
I [auth F]d5y5sf_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
M [auth K]d5y5sk_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
Sd5y5ss_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
Yd5y5sy_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
BA [auth 2]d5y5s2_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
DA [auth 4]d5y5s4_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
F [auth B]d5y5sb_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
FA [auth 6]d5y5s6_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
H [auth E]d5y5se_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
HA [auth 8]d5y5s8_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
J [auth G]d5y5sg_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
JA [auth 0]d5y5s0_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
L [auth J]d5y5sj_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
Pd5y5sp_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
Rd5y5sr_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
Td5y5st_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
Vd5y5sv_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
Xd5y5sx_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
Zd5y5sz_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)
Nd5y5sn_ Membrane and cell surface proteins and peptides Light-harvesting complex subunits Light-harvesting complex subunits automated matches automated matches (Thermochromatium tepidum ) [TaxId: 1050 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth C]SCOP2B SuperfamilyPRC cytochrome c repeat-like 8090735 3002452 SCOP2B (2022-06-29)
A [auth C]SCOP2B SuperfamilyPRC cytochrome c repeat-like 8073228 3002452 SCOP2B (2022-06-29)
D [auth H]SCOP2B SuperfamilyPRC-barrel domain 8097584 3000637 SCOP2B (2022-06-29)
D [auth H]SCOP2B SuperfamilyPhotosystem II reaction centre subunit H, transmembrane region 8100954 3000750 SCOP2B (2022-06-29)
BA [auth 2]SCOP2B SuperfamilyLight-harvesting complex subunits 8076355 3000199 SCOP2B (2022-06-29)
DA [auth 4]SCOP2B SuperfamilyLight-harvesting complex subunits 8076355 3000199 SCOP2B (2022-06-29)
F [auth B]SCOP2B SuperfamilyLight-harvesting complex subunits 8076355 3000199 SCOP2B (2022-06-29)
FA [auth 6]SCOP2B SuperfamilyLight-harvesting complex subunits 8076355 3000199 SCOP2B (2022-06-29)
H [auth E]SCOP2B SuperfamilyLight-harvesting complex subunits 8076355 3000199 SCOP2B (2022-06-29)
HA [auth 8]SCOP2B SuperfamilyLight-harvesting complex subunits 8076355 3000199 SCOP2B (2022-06-29)
J [auth G]SCOP2B SuperfamilyLight-harvesting complex subunits 8076355 3000199 SCOP2B (2022-06-29)
JA [auth 0]SCOP2 FamilyLight-harvesting complex subunits 8076354 4003043 SCOP2 (2022-06-29)
JA [auth 0]SCOP2 SuperfamilyLight-harvesting complex subunits 8076355 3000199 SCOP2 (2022-06-29)
L [auth J]SCOP2B SuperfamilyLight-harvesting complex subunits 8076355 3000199 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyLight-harvesting complex subunits 8076355 3000199 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyLight-harvesting complex subunits 8076355 3000199 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyLight-harvesting complex subunits 8076355 3000199 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyLight-harvesting complex subunits 8076355 3000199 SCOP2B (2022-06-29)
XSCOP2B SuperfamilyLight-harvesting complex subunits 8076355 3000199 SCOP2B (2022-06-29)
ZSCOP2B SuperfamilyLight-harvesting complex subunits 8076355 3000199 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyLight-harvesting complex subunits 8076355 3000199 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth C]CytoC_RCe5y5sC1 A: few secondary structure elementsX: Multiheme cytochromesH: Photosynthetic reaction centre (cytochrome subunit) (From Topology)T: Photosynthetic reaction centre (cytochrome subunit)F: CytoC_RCECOD (1.6)
B [auth L]Photo_RCe5y5sL1 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: Photo_RCECOD (1.6)
C [auth M]Photo_RCe5y5sM1 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: Photo_RCECOD (1.6)
D [auth H]PRCH_Ce5y5sH2 A: beta barrelsX: SH3H: PRC-barrel domain (From Topology)T: PRC-barrel domainF: PRCH_CECOD (1.6)
D [auth H]PRCH_Ne5y5sH1 A: extended segmentsX: Photosystem II reaction centre subunit H, transmembrane region (From Topology)H: Photosystem II reaction centre subunit H, transmembrane region (From Topology)T: Photosystem II reaction centre subunit H, transmembrane regionF: PRCH_NECOD (1.6)
AA [auth 1]LHC_likee5y5s11 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
E [auth A]LHC_likee5y5sA1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
EA [auth 5]LHC_likee5y5s51 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
IA [auth 9]LHC_likee5y5s91 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
K [auth I]LHC_likee5y5sI1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
OLHC_likee5y5sO1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
QLHC_likee5y5sQ1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
ULHC_likee5y5sU1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
WLHC_likee5y5sW1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
CA [auth 3]LHC_likee5y5s31 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
G [auth D]LHC_likee5y5sD1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
GA [auth 7]LHC_likee5y5s71 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
I [auth F]LHC_likee5y5sF1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
M [auth K]LHC_likee5y5sK1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
SLHC_likee5y5sS1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
YLHC_likee5y5sY1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
BA [auth 2]LHC_likee5y5s21 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
DA [auth 4]LHC_likee5y5s41 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
F [auth B]LHC_likee5y5sB1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
FA [auth 6]LHC_likee5y5s61 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
H [auth E]LHC_likee5y5sE1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
HA [auth 8]LHC_likee5y5s81 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
J [auth G]LHC_likee5y5sG1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
JA [auth 0]LHC_likee5y5s01 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
L [auth J]LHC_likee5y5sJ1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
PLHC_likee5y5sP1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
RLHC_likee5y5sR1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
TLHC_likee5y5sT1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
VLHC_likee5y5sV1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
XLHC_likee5y5sX1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
ZLHC_likee5y5sZ1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)
NLHC_likee5y5sN1 A: extended segmentsX: Bacterial light-harvesting complex subunits (From Topology)H: Bacterial light-harvesting complex subunits (From Topology)T: Bacterial light-harvesting complex subunitsF: LHC_likeECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A [auth C]1.10.468.10 Mainly Alpha Orthogonal Bundle Photosynthetic Reaction Center, subunit C domain 2CATH (4.3.0)
B [auth L]1.20.85.10 Mainly Alpha Up-down Bundle Photosynthetic Reaction Center, subunit M domain 1CATH (4.3.0)
C [auth M]1.20.85.10 Mainly Alpha Up-down Bundle Photosynthetic Reaction Center, subunit M domain 1CATH (4.3.0)
D [auth H]4.10.540.10 Few Secondary Structures Irregular Photosynthetic Reaction Center Chain H, domain 1CATH (4.3.0)
D [auth H]3.90.50.10 Alpha Beta Alpha-Beta Complex Photosynthetic Reaction Center Chain H, domain 2CATH (4.3.0)
AA [auth 1]4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
E [auth A]4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
EA [auth 5]4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
IA [auth 9]4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
K [auth I]4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
O4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
Q4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
U4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
W4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
CA [auth 3]4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
G [auth D]4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
GA [auth 7]4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
I [auth F]4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
M [auth K]4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
S4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
Y4.10.220.20 Few Secondary Structures Irregular Light-harvesting Protein Light-harvesting complexCATH (4.3.0)
BA [auth 2]1.20.5.250 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
DA [auth 4]1.20.5.250 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
F [auth B]1.20.5.250 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
FA [auth 6]1.20.5.250 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
HA [auth 8]1.20.5.250 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
J [auth G]1.20.5.250 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
JA [auth 0]1.20.5.250 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
L [auth J]1.20.5.250 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
P1.20.5.250 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
R1.20.5.250 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
T1.20.5.250 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
V1.20.5.250 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
X1.20.5.250 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
Z1.20.5.250 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
N1.20.5.250 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth C]PF02276Photosynthetic reaction centre cytochrome C subunit (CytoC_RC)Photosynthetic reaction centre cytochrome C subunit- Family
B [auth L]PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
C [auth M]PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
D [auth H]PF05239PRC-barrel domain (PRC)PRC-barrel domainThe PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, ...The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, archaea and plants. This domain is also present at the carboxyl terminus of the pan-bacterial protein RimM, which is involved in ribosomal maturation and processing of 16S rRNA. A family of small proteins conserved in all known euryarchaea are composed entirely of a single stand-alone copy of the domain [1].
Domain
PF00556Antenna complex alpha/beta subunit (LHC)Antenna complex alpha/beta subunit- Domain
PF00556Antenna complex alpha/beta subunit (LHC)Antenna complex alpha/beta subunit- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth C]Photosynthetic reaction center cytochrome c subunit
B [auth L]Photosynthetic reaction center L subunit
C [auth M]Photosynthetic reaction center M subunit
D [auth H]Photosynthetic reaction center H subunit
LH1 alpha polypeptide
LH1 beta polypeptide

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth C]IPR036280Multiheme cytochrome superfamilyHomologous Superfamily
A [auth C]IPR023119Multihaem cytochrome, PRC subunit superfamilyHomologous Superfamily
A [auth C]IPR003158Photosynthetic reaction centre, cytochrome c subunitFamily
B [auth L]IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
B [auth L]IPR000484Photosynthetic reaction centre, L/MFamily
B [auth L]IPR005871Photosynthetic reaction centre, L subunitFamily
C [auth M]IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
C [auth M]IPR005781Photosynthetic reaction centre, M subunitFamily
C [auth M]IPR000484Photosynthetic reaction centre, L/MFamily
D [auth H]IPR014747Bacterial photosynthetic reaction centre, H-chain, C-terminalHomologous Superfamily
D [auth H]IPR015810Photosynthetic reaction centre, H subunit, N-terminalDomain
D [auth H]IPR005652Photosynthetic reaction centre, H subunitFamily
D [auth H]IPR037097Photosynthetic reaction centre, H subunit, N-terminal domain superfamilyHomologous Superfamily
D [auth H]IPR011033PRC-barrel-like superfamilyHomologous Superfamily
D [auth H]IPR027275PRC-barrel domainDomain
IPR000066Antenna complex, alpha/beta subunitDomain
IPR018332Antenna complex, alpha subunitFamily
IPR002361Antenna complex, alpha subunit conserved siteConserved Site
IPR035889Light-harvesting complexHomologous Superfamily
IPR000066Antenna complex, alpha/beta subunitDomain
IPR023624Antenna complex, beta domain superfamilyHomologous Superfamily
IPR035889Light-harvesting complexHomologous Superfamily
IPR002362Light-harvesting protein B beta chainFamily