6EN8
SaFadR in complex with dsDNA
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Homeodomain-like | 8090128 | 3000001 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | TetR C-terminal domain-like | 8090129 | 3000086 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Homeodomain-like | 8090128 | 3000001 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | TetR C-terminal domain-like | 8090129 | 3000086 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | TetR C-terminal domain-like | 8090129 | 3000086 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Homeodomain-like | 8090128 | 3000001 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | TetR C-terminal domain-like | 8090129 | 3000086 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Homeodomain-like | 8090128 | 3000001 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Homeodomain-like | 8090128 | 3000001 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | TetR C-terminal domain-like | 8090129 | 3000086 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | TetR C-terminal domain-like | 8090129 | 3000086 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Homeodomain-like | 8090128 | 3000001 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | TetR_N | e6en8A1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: TetR_N | ECOD (1.6) |
A | TetR_C_9 | e6en8A2 | A: alpha bundles | X: Tetracyclin repressor-like, C-terminal domain (From Topology) | H: Tetracyclin repressor-like, C-terminal domain (From Topology) | T: Tetracyclin repressor-like, C-terminal domain | F: TetR_C_9 | ECOD (1.6) |
B | TetR_N | e6en8B2 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: TetR_N | ECOD (1.6) |
B | TetR_C_9 | e6en8B1 | A: alpha bundles | X: Tetracyclin repressor-like, C-terminal domain (From Topology) | H: Tetracyclin repressor-like, C-terminal domain (From Topology) | T: Tetracyclin repressor-like, C-terminal domain | F: TetR_C_9 | ECOD (1.6) |
C | TetR_N | e6en8C1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: TetR_N | ECOD (1.6) |
C | TetR_C_9 | e6en8C2 | A: alpha bundles | X: Tetracyclin repressor-like, C-terminal domain (From Topology) | H: Tetracyclin repressor-like, C-terminal domain (From Topology) | T: Tetracyclin repressor-like, C-terminal domain | F: TetR_C_9 | ECOD (1.6) |
D | TetR_N | e6en8D1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: TetR_N | ECOD (1.6) |
D | TetR_C_9 | e6en8D2 | A: alpha bundles | X: Tetracyclin repressor-like, C-terminal domain (From Topology) | H: Tetracyclin repressor-like, C-terminal domain (From Topology) | T: Tetracyclin repressor-like, C-terminal domain | F: TetR_C_9 | ECOD (1.6) |
E | TetR_N | e6en8E2 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: TetR_N | ECOD (1.6) |
E | TetR_C_9 | e6en8E1 | A: alpha bundles | X: Tetracyclin repressor-like, C-terminal domain (From Topology) | H: Tetracyclin repressor-like, C-terminal domain (From Topology) | T: Tetracyclin repressor-like, C-terminal domain | F: TetR_C_9 | ECOD (1.6) |
F | TetR_N | e6en8F2 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: TetR_N | ECOD (1.6) |
F | TetR_C_9 | e6en8F1 | A: alpha bundles | X: Tetracyclin repressor-like, C-terminal domain (From Topology) | H: Tetracyclin repressor-like, C-terminal domain (From Topology) | T: Tetracyclin repressor-like, C-terminal domain | F: TetR_C_9 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 1.10.10.60 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Homeodomain-like | CATH (utative) |
D | 1.10.10.60 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Homeodomain-like | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Transcriptional regulator TetR family | - | - | ||
G [auth Q], I [auth Y] | DNA (5'-D(*GP*TP*CP*GP*AP*CP*TP*CP*AP*AP*AP*AP*AP*TP*CP*AP*AP*GP*TP*AP*G)-3') | - | - | - |
H [auth X], J [auth Z] | DNA (5'-D(*CP*TP*AP*CP*TP*TP*GP*AP*TP*TP*TP*TP*TP*GP*AP*GP*TP*CP*GP*AP*C)-3') | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR023772 | DNA-binding HTH domain, TetR-type, conserved site | Conserved Site | |
IPR009057 | Homedomain-like superfamily | Homologous Superfamily | |
IPR050624 | HTH-type Transcriptional Regulator | Family | |
IPR001647 | DNA-binding HTH domain, TetR-type | Domain |