8DHT
Crystal structure of a typeIII Rubisco
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | RuBisCO_large_N | e8dhtA2 | A: a+b two layers | X: Alpha-beta plaits | H: RuBisCO, large subunit, small (N-terminal) domain (From Topology) | T: RuBisCO, large subunit, small (N-terminal) domain | F: RuBisCO_large_N | ECOD (1.6) |
A | RuBisCO_large | e8dhtA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: RuBisCO_large | ECOD (1.6) |
B | RuBisCO_large_N | e8dhtB2 | A: a+b two layers | X: Alpha-beta plaits | H: RuBisCO, large subunit, small (N-terminal) domain (From Topology) | T: RuBisCO, large subunit, small (N-terminal) domain | F: RuBisCO_large_N | ECOD (1.6) |
B | RuBisCO_large | e8dhtB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: RuBisCO_large | ECOD (1.6) |
C | RuBisCO_large_N | e8dhtC2 | A: a+b two layers | X: Alpha-beta plaits | H: RuBisCO, large subunit, small (N-terminal) domain (From Topology) | T: RuBisCO, large subunit, small (N-terminal) domain | F: RuBisCO_large_N | ECOD (1.6) |
C | RuBisCO_large | e8dhtC1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: RuBisCO_large | ECOD (1.6) |
D | RuBisCO_large_N | e8dhtD1 | A: a+b two layers | X: Alpha-beta plaits | H: RuBisCO, large subunit, small (N-terminal) domain (From Topology) | T: RuBisCO, large subunit, small (N-terminal) domain | F: RuBisCO_large_N | ECOD (1.6) |
D | RuBisCO_large | e8dhtD2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: RuBisCO_large | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02788 | Ribulose bisphosphate carboxylase large chain, N-terminal domain (RuBisCO_large_N) | Ribulose bisphosphate carboxylase large chain, N-terminal domain | The N-terminal domain of RuBisCO large chain adopts a ferredoxin-like fold. | Domain | |
PF00016 | Ribulose bisphosphate carboxylase large chain, catalytic domain (RuBisCO_large) | Ribulose bisphosphate carboxylase large chain, catalytic domain | The C-terminal domain of RuBisCO large chain is the catalytic domain adopting a TIM barrel fold. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036376 | Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily | Homologous Superfamily | |
IPR000685 | Ribulose bisphosphate carboxylase, large subunit, C-terminal | Domain | |
IPR033966 | RuBisCO | Family | |
IPR036422 | RuBisCO large subunit, N-terminal domain superfamily | Homologous Superfamily | |
IPR017712 | Ribulose bisphosphate carboxylase, type III | Family | |
IPR017443 | Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal | Domain |