X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP8.52770.2M ammonium acetate 25% PEG3350 0.1M Tris, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
2.5151.02

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 62.297α = 107.77
b = 96.491β = 91.75
c = 150.679γ = 92.41
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 4mirrors2009-04-04MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-2ESRFID14-2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.819.84

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.819.8477091407699.040.190060.186630.25505RANDOM33.483
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.010.01-0.01-0.01
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.5
r_dihedral_angle_3_deg19.63
r_dihedral_angle_4_deg19.478
r_dihedral_angle_1_deg6.265
r_scangle_it2.61
r_scbond_it1.818
r_angle_refined_deg1.503
r_mcbond_it1.108
r_mcangle_it1.018
r_angle_other_deg0.96
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.5
r_dihedral_angle_3_deg19.63
r_dihedral_angle_4_deg19.478
r_dihedral_angle_1_deg6.265
r_scangle_it2.61
r_scbond_it1.818
r_angle_refined_deg1.503
r_mcbond_it1.108
r_mcangle_it1.018
r_angle_other_deg0.96
r_symmetry_vdw_other0.277
r_symmetry_vdw_refined0.24
r_nbd_refined0.236
r_nbd_other0.204
r_nbtor_refined0.19
r_symmetry_hbond_refined0.173
r_xyhbond_nbd_refined0.171
r_nbtor_other0.094
r_mcbond_other0.083
r_chiral_restr0.078
r_xyhbond_nbd_other0.064
r_bond_refined_d0.014
r_bond_other_d0.006
r_gen_planes_refined0.004
r_gen_planes_other0.001
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms21669
Nucleic Acid Atoms
Solvent Atoms1
Heterogen Atoms

Software

Software
Software NamePurpose
ADSCdata collection
PHASERphasing
REFMACrefinement
XDSdata reduction
SCALAdata scaling