GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 1G16 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 1G16_GDP_C_203 | 87% | 3% | 0.081 | 0.954 | 3.09 | 3.08 | 10 | 9 | 0 | 0 | 100% | 1 |
| 1G16_GDP_A_201 | 82% | 3% | 0.092 | 0.946 | 2.95 | 3.1 | 10 | 10 | 0 | 0 | 100% | 1 |
| 1G16_GDP_D_204 | 58% | 3% | 0.123 | 0.9 | 3.16 | 3.12 | 12 | 10 | 0 | 0 | 100% | 1 |
| 1G16_GDP_B_202 | 35% | 3% | 0.155 | 0.844 | 2.98 | 3.12 | 11 | 10 | 1 | 0 | 100% | 1 |
| 4Z8Y_GDP_A_201 | 86% | 39% | 0.091 | 0.959 | 1.05 | 1.31 | 2 | 4 | 0 | 0 | 100% | 1 |
| 3CPH_GDP_A_302 | 84% | 43% | 0.116 | 0.979 | 1.01 | 1.19 | 1 | 3 | 0 | 0 | 100% | 1 |
| 4ZDW_GDP_A_201 | 51% | 45% | 0.168 | 0.923 | 0.98 | 1.15 | 1 | 2 | 4 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 2CXX_GDP_B_2401 | 100% | 29% | 0.031 | 0.989 | 1.26 | 1.57 | 1 | 3 | 0 | 0 | 100% | 1 |
| 4LUC_GDP_A_204 | 100% | 40% | 0.036 | 0.992 | 1.22 | 1.11 | 2 | 2 | 0 | 0 | 100% | 1 |
| 5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
| 4PZZ_GDP_A_201 | 100% | 54% | 0.035 | 0.989 | 0.92 | 0.86 | 1 | 1 | 0 | 0 | 100% | 1 |
