PAP: 3'-PHOSPHATE-ADENOSINE-5'-DIPHOSPHATE
PAP is a Ligand Of Interest in 1M4D designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 1M4D_PAP_A_602 | 10% | 15% | 0.265 | 0.765 | 2.23 | 1.58 | 4 | 5 | 2 | 0 | 100% | 1 |
| 1M4G_PAP_B_600 | 33% | 29% | 0.223 | 0.902 | 1.53 | 1.31 | 4 | 4 | 0 | 0 | 100% | 1 |
| 1M4I_PAP_A_602 | 18% | 22% | 0.222 | 0.811 | 1.9 | 1.34 | 5 | 7 | 1 | 0 | 100% | 1 |
| 5MEX_PAP_A_401 | 84% | 21% | 0.09 | 0.975 | 2.03 | 1.31 | 8 | 3 | 0 | 0 | 87% | 0.871 |
| 8OOV_PAP_B_201 | 82% | 49% | 0.084 | 0.938 | 0.92 | 1.04 | 1 | 3 | 1 | 0 | 100% | 1 |
| 3MGB_PAP_B_286 | 77% | 36% | 0.107 | 0.971 | 1.05 | 1.45 | 1 | 5 | 0 | 0 | 87% | 0.871 |
| 8A56_PAP_A_607 | 77% | 65% | 0.134 | 0.974 | 0.62 | 0.71 | - | 1 | 0 | 0 | 100% | 1 |
| 8VR7_PAP_E_202 | 59% | 55% | 0.134 | 0.917 | 0.82 | 0.9 | 1 | 1 | 0 | 0 | 100% | 1 |
