NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
NAP is a Ligand Of Interest in 1YBM designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 1YBM_NAP_A_400 | 79% | 21% | 0.106 | 0.95 | 2.04 | 1.27 | 6 | 5 | 3 | 0 | 100% | 1 |
| 1YBM_NAP_B_401 | 65% | 20% | 0.123 | 0.924 | 1.76 | 1.62 | 5 | 8 | 3 | 0 | 100% | 1 |
| 1XQ6_NAP_A_800 | 85% | 21% | 0.085 | 0.949 | 1.93 | 1.37 | 7 | 5 | 5 | 0 | 100% | 1 |
| 2Q4B_NAP_A_400 | 66% | 3% | 0.135 | 0.941 | 2.69 | 3.42 | 16 | 17 | 0 | 1 | 100% | 6 |
| 2Q46_NAP_A_800 | 65% | 4% | 0.125 | 0.925 | 2.58 | 3.25 | 13 | 12 | 5 | 1 | 100% | 12 |
| 2X9G_NAP_B_1269 | 100% | 46% | 0.031 | 0.997 | 0.96 | 1.14 | 1 | 5 | 0 | 0 | 100% | 1 |
| 2J8T_NAP_A_1316 | 100% | 49% | 0.033 | 0.996 | 0.97 | 1.01 | 3 | 2 | 1 | 0 | 100% | 1 |
| 3LQL_NAP_A_500 | 100% | 43% | 0.035 | 0.996 | 1.13 | 1.07 | 3 | 4 | 1 | 0 | 100% | 1 |
| 4CQM_NAP_F_301 | 100% | 49% | 0.032 | 0.993 | 0.8 | 1.17 | 1 | 4 | 2 | 0 | 100% | 1 |
| 3LD5_NAP_A_500 | 100% | 31% | 0.033 | 0.993 | 1.34 | 1.4 | 7 | 6 | 2 | 0 | 100% | 1 |
