CDP: CYTIDINE-5'-DIPHOSPHATE
CDP is a Ligand Of Interest in 2VBV designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2VBV_CDP_B_1137 | 85% | 27% | 0.101 | 0.966 | 1.7 | 1.28 | 7 | 6 | 0 | 0 | 100% | 1 |
| 2VBV_CDP_A_1135 | 77% | 32% | 0.13 | 0.969 | 1.27 | 1.44 | 3 | 6 | 0 | 0 | 100% | 1 |
| 2VBU_CDP_A_1133 | 96% | 45% | 0.078 | 0.989 | 0.89 | 1.22 | - | 3 | 0 | 0 | 100% | 1 |
| 2OYN_CDP_A_301 | 91% | 48% | 0.088 | 0.976 | 0.95 | 1.07 | 1 | 3 | 0 | 0 | 100% | 1 |
| 2VBT_CDP_A_1137 | 63% | 34% | 0.145 | 0.939 | 1.44 | 1.18 | 3 | 1 | 0 | 0 | 100% | 1 |
| 6SDK_CDP_C_301 | 100% | 5% | 0.043 | 0.987 | 3.72 | 1.58 | 12 | 6 | 0 | 0 | 100% | 1 |
| 3BOS_CDP_B_300 | 100% | 55% | 0.046 | 0.988 | 0.92 | 0.81 | 1 | 1 | 0 | 0 | 100% | 1 |
| 8VHP_CDP_D_809 | 98% | 52% | 0.051 | 0.975 | 0.89 | 0.96 | - | 2 | 2 | 0 | 100% | 1 |
| 1ORR_CDP_B_1301 | 96% | 34% | 0.06 | 0.97 | 1.28 | 1.32 | 3 | 6 | 0 | 0 | 100% | 1 |
| 4FKX_CDP_C_201 | 95% | 60% | 0.073 | 0.979 | 0.79 | 0.76 | - | - | 0 | 0 | 100% | 1 |
