PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 2VMO designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2VMO_PLP_A_501 | 78% | 47% | 0.095 | 0.949 | 1.01 | 1.04 | 2 | 2 | 1 | 0 | 94% | 0.9375 |
| 2VIA_PLP_A_1406 | 94% | 44% | 0.065 | 0.975 | 1.1 | 1.06 | 2 | 2 | 1 | 0 | 94% | 0.9375 |
| 2VMW_PLP_A_501 | 92% | 50% | 0.071 | 0.971 | 1 | 0.93 | 2 | 2 | 1 | 0 | 94% | 0.9375 |
| 1KKJ_PLP_A_501 | 91% | 5% | 0.088 | 0.974 | 1.65 | 3.49 | 4 | 10 | 0 | 0 | 100% | 0.9375 |
| 1KKP_PLP_A_501 | 90% | 11% | 0.081 | 0.976 | 1.69 | 2.5 | 4 | 8 | 1 | 0 | 94% | 0.9375 |
| 1KL1_PLP_A_501 | 87% | 9% | 0.091 | 0.975 | 1.74 | 2.67 | 5 | 7 | 1 | 0 | 94% | 0.9375 |
| 2BIE_PLP_B_1361 | 100% | 28% | 0.039 | 0.989 | 1.48 | 1.39 | 4 | 3 | 1 | 0 | 100% | 0.9375 |
| 9J0V_PLP_A_301 | 100% | 36% | 0.037 | 0.987 | 0.82 | 1.68 | - | 5 | 0 | 0 | 100% | 0.9375 |
| 4NOG_PLP_A_501 | 100% | 38% | 0.042 | 0.992 | 1.24 | 1.18 | 3 | 1 | 0 | 0 | 100% | 1 |
| 3WQC_PLP_B_402 | 100% | 21% | 0.045 | 0.993 | 1.96 | 1.38 | 4 | 4 | 0 | 0 | 100% | 0.9375 |
| 4HT3_PLP_B_401 | 100% | 15% | 0.045 | 0.993 | 2.04 | 1.72 | 3 | 5 | 0 | 0 | 100% | 0.9375 |
