DED: 2-DIMETHYLAMINO-ETHYL-DIPHOSPHATE
DED is a Ligand Of Interest in 2VNP designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2VNP_DED_A_1182 | 92% | 35% | 0.093 | 0.982 | 0.99 | 1.54 | - | 2 | 4 | 0 | 100% | 1 |
2VNP_DED_B_1186 | 87% | 45% | 0.102 | 0.976 | 0.86 | 1.26 | - | 2 | 1 | 0 | 100% | 1 |
1NFS_DED_A_301 | 42% | 12% | 0.176 | 0.896 | 2.3 | 1.81 | 2 | 3 | 2 | 0 | 100% | 1 |