NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 2YP1 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2YP1_NAG_D_381 | 22% | 63% | 0.178 | 0.794 | 0.64 | 0.77 | - | - | 0 | 0 | 100% | 0.9333 |
2YP1_NAG_C_381 | 6% | 47% | 0.247 | 0.678 | 0.65 | 1.38 | - | 2 | 1 | 0 | 100% | 0.9333 |
2YP1_NAG_D_391 | 5% | 49% | 0.239 | 0.648 | 0.52 | 1.44 | - | 4 | 0 | 0 | 100% | 0.9333 |
2YP1_NAG_D_411 | 1% | 61% | 0.298 | 0.502 | 0.56 | 0.93 | - | 1 | 0 | 0 | 100% | 0.9333 |
6EL0_NAG_A_407 | 96% | 56% | 0.062 | 0.973 | 0.47 | 1.22 | - | 1 | 0 | 0 | 100% | 0.9333 |
5OY1_NAG_A_407 | 95% | 65% | 0.063 | 0.965 | 0.4 | 0.94 | - | 1 | 0 | 0 | 100% | 0.9333 |
6EKZ_NAG_A_407 | 94% | 65% | 0.066 | 0.965 | 0.44 | 0.9 | - | 1 | 0 | 0 | 100% | 0.9333 |
6EL4_NAG_A_407 | 94% | 63% | 0.065 | 0.964 | 0.41 | 0.98 | - | 1 | 0 | 0 | 100% | 0.9333 |
5OY2_NAG_A_1006 | 94% | 62% | 0.067 | 0.964 | 0.42 | 1 | - | 1 | 0 | 0 | 100% | 0.9333 |
5LDS_NAG_B_1007 | 100% | 67% | 0.022 | 0.995 | 0.48 | 0.79 | - | - | 0 | 0 | 100% | 0.9333 |
5O5D_NAG_A_601 | 100% | 65% | 0.022 | 0.994 | 0.32 | 0.99 | - | 1 | 0 | 0 | 100% | 0.9333 |
6MUG_NAG_G_629 | 100% | 76% | 0.022 | 0.994 | 0.35 | 0.58 | - | - | 0 | 0 | 100% | 0.9333 |
3PPS_NAG_B_760 | 100% | 44% | 0.028 | 0.993 | 0.57 | 1.57 | - | 3 | 0 | 0 | 100% | 0.9333 |
5O59_NAG_A_601 | 100% | 70% | 0.024 | 0.993 | 0.3 | 0.85 | - | - | 0 | 0 | 100% | 0.9333 |