Ligand validation:3D5O

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 3D5O designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
3D5O_NAG_B_208	27%	66%	0.138	0.781	0.63	0.67	-	-	0	0	100%	0.9333
3D5O_NAG_C_208	10%	68%	0.15	0.655	0.6	0.64	-	-	0	0	100%	0.9333
3D5O_NAG_A_208	9%	63%	0.154	0.634	0.55	0.85	-	-	0	0	100%	0.9333
3D5O_NAG_E_208	7%	56%	0.133	0.592	0.78	0.93	1	1	0	0	100%	0.9333
3D5O_NAG_D_208	4%	66%	0.157	0.531	0.72	0.6	-	-	0	0	100%	0.9333
3KQR_NAG_B_207	50%	57%	0.133	0.881	0.35	1.29	-	3	1	0	100%	0.9333
4AVS_NAG_D_205	42%	63%	0.18	0.898	0.62	0.81	-	1	0	0	100%	0.9333
4AYU_NAG_E_500	42%	32%	0.183	0.901	1.53	1.18	2	2	0	0	100%	0.9333
2W08_NAG_D_207	34%	1%	0.188	0.872	6.85	1.49	9	1	0	4	100%	0.9333
4AVV_NAG_A_1214	21%	55%	0.161	0.767	0.53	1.17	-	3	0	0	100%	0.672
3H0C_NAG_A_794	100%	56%	0.021	0.995	0.61	1.08	-	1	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333
3GXM_NAG_A_498	100%	45%	0.026	0.992	0.75	1.34	-	2	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.