TRD: TRIDECANE
TRD is a Ligand Of Interest in 3OMI designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3OMI_TRD_A_610 | 51% | 82% | 0.125 | 0.877 | 0.36 | 0.43 | - | - | 1 | 0 | 100% | 1 |
3OMI_TRD_D_303 | 46% | 80% | 0.129 | 0.862 | 0.21 | 0.63 | - | - | 1 | 0 | 100% | 1 |
3OMI_TRD_B_305 | 41% | 85% | 0.132 | 0.901 | 0.23 | 0.5 | - | - | 3 | 0 | 69% | 0.5192 |
3OMI_TRD_D_304 | 19% | 89% | 0.164 | 0.843 | 0.25 | 0.39 | - | - | 0 | 0 | 54% | 0.5385 |
3OMI_TRD_C_607 | 19% | 83% | 0.177 | 0.797 | 0.33 | 0.44 | - | - | 0 | 0 | 85% | 0.8462 |
3OMI_TRD_A_606 | 10% | 86% | 0.254 | 0.847 | 0.31 | 0.4 | - | - | 0 | 0 | 54% | 0.5385 |
3OMI_TRD_A_609 | 9% | 81% | 0.25 | 0.747 | 0.26 | 0.56 | - | - | 1 | 0 | 100% | 1 |
3OMI_TRD_A_605 | 9% | 85% | 0.202 | 0.776 | 0.27 | 0.46 | - | - | 0 | 0 | 54% | 0.5385 |
3OMI_TRD_A_604 | 8% | 88% | 0.169 | 0.725 | 0.29 | 0.38 | - | - | 0 | 0 | 54% | 0.5385 |
6PW0_TRD_D_302 | 43% | 73% | 0.196 | 0.921 | 0.12 | 0.9 | - | - | 0 | 0 | 100% | 1 |
6PW1_TRD_D_301 | 42% | 76% | 0.141 | 0.913 | 0.12 | 0.81 | - | - | 0 | 0 | 69% | 0.6923 |
3FYE_TRD_D_1007 | 29% | 81% | 0.221 | 0.881 | 0.23 | 0.59 | - | - | 1 | 0 | 100% | 1 |
3OM3_TRD_C_3 | 28% | 82% | 0.226 | 0.878 | 0.27 | 0.53 | - | - | 1 | 0 | 100% | 1 |
6CI0_TRD_D_303 | 26% | 78% | 0.203 | 0.899 | 0.1 | 0.77 | - | - | 2 | 0 | 69% | 0.6923 |
4ZR1_TRD_A_410 | 49% | 75% | 0.18 | 0.926 | 0.12 | 0.84 | - | - | 1 | 0 | 100% | 1 |
6LPK_TRD_A_2422 | 41% | 98% | 0.14 | 0.853 | 0.14 | 0.14 | - | - | 0 | 0 | 100% | 1 |
6LPJ_TRD_A_2422 | 38% | 98% | 0.154 | 0.855 | 0.13 | 0.16 | - | - | 0 | 0 | 100% | 1 |