DGJ: (2R,3S,4R,5S)-2-(hydroxymethyl)piperidine-3,4,5-triol
DGJ is a Ligand Of Interest in 4DO5 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4DO5_DGJ_B_509 | 85% | 48% | 0.103 | 0.969 | 0.79 | 1.2 | - | 3 | 0 | 0 | 100% | 1 |
| 4DO5_DGJ_A_509 | 85% | 58% | 0.121 | 0.987 | 0.28 | 1.32 | - | 2 | 0 | 0 | 100% | 1 |
| 3THD_DGJ_D_900 | 100% | 10% | 0.042 | 0.988 | 1.17 | 3.13 | 1 | 7 | 1 | 0 | 100% | 1 |
| 4FNS_DGJ_D_801 | 89% | 38% | 0.091 | 0.971 | 1.2 | 1.21 | 1 | 1 | 0 | 0 | 100% | 1 |
| 4CU8_DGJ_A_1985 | 86% | 38% | 0.114 | 0.984 | 1.3 | 1.13 | 1 | 1 | 1 | 0 | 100% | 1 |
| 4D1J_DGJ_B_600 | 74% | 59% | 0.142 | 0.974 | 0.7 | 0.86 | - | 1 | 0 | 0 | 100% | 1 |
| 3S5Y_DGJ_A_801 | 72% | 38% | 0.145 | 0.968 | 0.78 | 1.63 | - | 1 | 0 | 0 | 100% | 1 |
