D12: DODECANE
D12 is a Ligand Of Interest in 4DX5 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4DX5_D12_A_1111 | 49% | 59% | 0.128 | 0.875 | 0.44 | 1.11 | - | - | 8 | 0 | 100% | 1 |
| 4DX5_D12_C_1108 | 21% | 60% | 0.216 | 0.824 | 0.4 | 1.12 | - | 1 | 0 | 0 | 100% | 1 |
| 4DX5_D12_C_1104 | 12% | 72% | 0.138 | 0.668 | 0.29 | 0.79 | - | - | 1 | 0 | 100% | 1 |
| 4DX5_D12_B_1106 | 5% | 75% | 0.247 | 0.656 | 0.23 | 0.74 | - | - | 1 | 0 | 100% | 1 |
| 4DX7_D12_C_1106 | 23% | 69% | 0.131 | 0.75 | 0.31 | 0.86 | - | - | 0 | 0 | 100% | 1 |
| 3UTY_D12_A_501 | 99% | 67% | 0.058 | 0.988 | 0.22 | 1.03 | - | 1 | 0 | 0 | 100% | 1 |
| 3UTX_D12_B_401 | 94% | 12% | 0.076 | 0.977 | 1.73 | 2.32 | 2 | 5 | 0 | 0 | 100% | 1 |
| 4Y9H_D12_A_305 | 70% | 83% | 0.094 | 0.909 | 0.26 | 0.52 | - | - | 0 | 0 | 100% | 1 |
| 3HAS_D12_A_401 | 69% | 0% | 0.096 | 0.91 | 3.48 | 6.45 | 6 | 5 | 0 | 0 | 100% | 1 |
| 5MZQ_D12_C_401 | 43% | 71% | 0.186 | 0.908 | 0.33 | 0.78 | - | - | 1 | 0 | 100% | 1 |
