TYD: THYMIDINE-5'-DIPHOSPHATE

TYD is a Ligand Of Interest in 4MZU designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4MZU_TYD_I_402 67% 46% 0.111 0.9180.65 1.41 - 400100%1
4MZU_TYD_K_402 64% 37% 0.122 0.920.63 1.83 - 400100%1
4MZU_TYD_B_402 62% 42% 0.122 0.9140.6 1.62 - 300100%1
4MZU_TYD_E_402 61% 40% 0.128 0.9150.64 1.67 - 540100%1
4MZU_TYD_C_402 54% 41% 0.138 0.9010.67 1.59 - 300100%1
4MZU_TYD_L_402 53% 41% 0.142 0.9040.69 1.57 - 210100%1
4MZU_TYD_F_402 51% 46% 0.127 0.8810.59 1.46 - 300100%1
4MZU_TYD_H_401 45% 35% 0.145 0.8770.71 1.81 - 210100%1
4MZU_TYD_A_402 44% 38% 0.157 0.8830.73 1.69 - 100100%1
4MZU_TYD_D_402 39% 44% 0.172 0.8780.69 1.45 - 320100%1
4MZU_TYD_G_402 37% 42% 0.165 0.8610.63 1.59 - 510100%1
4MZU_TYD_J_402 24% 41% 0.187 0.8170.72 1.55 - 100100%1
3OTI_TYD_B_377 99% 22% 0.054 0.9871.12 2.08 1 200100%1
3EVO_TYD_A_160 99% 32% 0.057 0.9881 1.68 1 300100%1
5WXK_TYD_A_401 99% 33% 0.06 0.9870.99 1.64 1 200100%1
3EM1_TYD_B_143 98% 31% 0.059 0.9841.01 1.71 1 300100%1
3RSC_TYD_A_397 98% 39% 0.055 0.9770.74 1.61 1 300100%1