4MZU
TYD: THYMIDINE-5'-DIPHOSPHATE
TYD is a Ligand Of Interest in 4MZU designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
4MZU_TYD_I_402 | 67% | 46% | 0.111 | 0.918 | 0.65 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |
4MZU_TYD_K_402 | 64% | 37% | 0.122 | 0.92 | 0.63 | 1.83 | - | 4 | 0 | 0 | 100% | 1 |
4MZU_TYD_B_402 | 62% | 42% | 0.122 | 0.914 | 0.6 | 1.62 | - | 3 | 0 | 0 | 100% | 1 |
4MZU_TYD_E_402 | 61% | 40% | 0.128 | 0.915 | 0.64 | 1.67 | - | 5 | 4 | 0 | 100% | 1 |
4MZU_TYD_C_402 | 54% | 41% | 0.138 | 0.901 | 0.67 | 1.59 | - | 3 | 0 | 0 | 100% | 1 |
4MZU_TYD_L_402 | 53% | 41% | 0.142 | 0.904 | 0.69 | 1.57 | - | 2 | 1 | 0 | 100% | 1 |
4MZU_TYD_F_402 | 51% | 46% | 0.127 | 0.881 | 0.59 | 1.46 | - | 3 | 0 | 0 | 100% | 1 |
4MZU_TYD_H_401 | 45% | 35% | 0.145 | 0.877 | 0.71 | 1.81 | - | 2 | 1 | 0 | 100% | 1 |
4MZU_TYD_A_402 | 44% | 38% | 0.157 | 0.883 | 0.73 | 1.69 | - | 1 | 0 | 0 | 100% | 1 |
4MZU_TYD_D_402 | 39% | 44% | 0.172 | 0.878 | 0.69 | 1.45 | - | 3 | 2 | 0 | 100% | 1 |
4MZU_TYD_G_402 | 37% | 42% | 0.165 | 0.861 | 0.63 | 1.59 | - | 5 | 1 | 0 | 100% | 1 |
4MZU_TYD_J_402 | 24% | 41% | 0.187 | 0.817 | 0.72 | 1.55 | - | 1 | 0 | 0 | 100% | 1 |
3OTI_TYD_B_377 | 99% | 22% | 0.054 | 0.987 | 1.12 | 2.08 | 1 | 2 | 0 | 0 | 100% | 1 |
3EVO_TYD_A_160 | 99% | 32% | 0.057 | 0.988 | 1 | 1.68 | 1 | 3 | 0 | 0 | 100% | 1 |
5WXK_TYD_A_401 | 99% | 33% | 0.06 | 0.987 | 0.99 | 1.64 | 1 | 2 | 0 | 0 | 100% | 1 |
3EM1_TYD_B_143 | 98% | 31% | 0.059 | 0.984 | 1.01 | 1.71 | 1 | 3 | 0 | 0 | 100% | 1 |
3RSC_TYD_A_397 | 98% | 39% | 0.055 | 0.977 | 0.74 | 1.61 | 1 | 3 | 0 | 0 | 100% | 1 |