GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 4XC8 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4XC8_GDP_A_1102 | 52% | 12% | 0.195 | 0.955 | 2.73 | 1.35 | 10 | 5 | 2 | 0 | 100% | 1 |
| 4XC8_GDP_B_1102 | 51% | 13% | 0.213 | 0.968 | 2.73 | 1.31 | 11 | 5 | 1 | 0 | 100% | 1 |
| 4XC6_GDP_A_1103 | 72% | 12% | 0.149 | 0.974 | 2.72 | 1.34 | 11 | 5 | 1 | 0 | 100% | 1 |
| 5CJT_GDP_A_1104 | 65% | 12% | 0.161 | 0.964 | 2.74 | 1.33 | 11 | 5 | 1 | 0 | 100% | 1 |
| 5CJW_GDP_A_1104 | 65% | 12% | 0.165 | 0.968 | 2.72 | 1.34 | 10 | 5 | 2 | 0 | 100% | 1 |
| 5CJV_GDP_A_1104 | 64% | 13% | 0.164 | 0.962 | 2.72 | 1.32 | 11 | 5 | 3 | 0 | 100% | 1 |
| 5CJU_GDP_A_1104 | 60% | 12% | 0.172 | 0.958 | 2.72 | 1.34 | 10 | 5 | 1 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 2CXX_GDP_B_2401 | 100% | 29% | 0.031 | 0.989 | 1.26 | 1.57 | 1 | 3 | 0 | 0 | 100% | 1 |
| 4LUC_GDP_A_204 | 100% | 40% | 0.036 | 0.992 | 1.22 | 1.11 | 2 | 2 | 0 | 0 | 100% | 1 |
| 5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
| 5KY2_GDP_A_403 | 100% | 48% | 0.036 | 0.989 | 0.98 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
