DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)
DGD is a Ligand Of Interest in 5H2F designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5H2F_DGD_c_919 | 72% | 45% | 0.124 | 0.958 | 0.98 | 1.15 | 4 | 6 | 0 | 0 | 94% | 0.9394 |
5H2F_DGD_C_517 | 67% | 43% | 0.131 | 0.95 | 0.85 | 1.33 | 3 | 12 | 0 | 0 | 94% | 0.9394 |
5H2F_DGD_c_917 | 67% | 49% | 0.143 | 0.962 | 0.97 | 1 | 3 | 3 | 0 | 0 | 94% | 0.9394 |
5H2F_DGD_C_519 | 63% | 47% | 0.147 | 0.952 | 0.82 | 1.2 | 2 | 9 | 0 | 0 | 94% | 0.9394 |
5H2F_DGD_c_918 | 59% | 49% | 0.154 | 0.946 | 0.94 | 1.03 | 4 | 4 | 0 | 0 | 94% | 0.9394 |
5H2F_DGD_C_518 | 48% | 42% | 0.169 | 0.922 | 0.96 | 1.28 | 3 | 10 | 0 | 0 | 94% | 0.9394 |
5H2F_DGD_H_102 | 39% | 44% | 0.186 | 0.905 | 1.02 | 1.16 | 3 | 6 | 0 | 0 | 94% | 0.9394 |
5H2F_DGD_h_102 | 27% | 45% | 0.202 | 0.857 | 0.97 | 1.14 | 3 | 5 | 0 | 0 | 94% | 0.9394 |
5H2F_DGD_D_407 | 4% | 37% | 0.288 | 0.708 | 1.18 | 1.31 | 3 | 6 | 0 | 0 | 76% | 0.7576 |
5H2F_DGD_d_406 | 2% | 40% | 0.321 | 0.658 | 1.24 | 1.09 | 3 | 3 | 0 | 0 | 65% | 0.6515 |
5GTI_DGD_h_103 | 96% | 52% | 0.05 | 0.967 | 0.89 | 0.96 | 3 | 3 | 0 | 0 | 94% | 0.9394 |
5V2C_DGD_C_516 | 95% | 43% | 0.067 | 0.983 | 0.89 | 1.29 | 5 | 10 | 0 | 0 | 94% | 0.9394 |
5WS6_DGD_h_103 | 92% | 53% | 0.065 | 0.968 | 0.86 | 0.96 | 3 | 3 | 0 | 0 | 94% | 0.9394 |
7YQ7_DGD_C_518 | 87% | 51% | 0.084 | 0.967 | 0.83 | 1.07 | 3 | 5 | 0 | 0 | 94% | 0.9394 |
8IR5_DGD_C_515 | 86% | 47% | 0.092 | 0.97 | 0.81 | 1.21 | 2 | 8 | 0 | 0 | 94% | 0.9394 |
8IRC_DGD_C_517 | 85% | 47% | 0.096 | 0.973 | 0.83 | 1.2 | 2 | 8 | 0 | 0 | 94% | 0.9394 |