Ligand validation:5NIT

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5NIT designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5NIT_NAG_A_607	75%	21%	0.112	0.945	1.49	1.81	2	6	0	0	100%	0.9333
5NIT_NAG_A_609	63%	29%	0.102	0.895	1.13	1.68	2	3	0	0	100%	0.9333
5NIT_NAG_A_608	43%	35%	0.178	0.903	0.83	1.71	-	4	0	0	100%	0.9333
3QVP_NAG_A_603	96%	67%	0.062	0.972	0.48	0.79	-	-	0	0	100%	0.9333
3QVR_NAG_A_605	93%	69%	0.065	0.96	0.53	0.67	-	-	0	0	100%	0.9333
1GAL_NAG_A_605	90%	20%	0.056	0.939	1.39	2	3	6	0	0	100%	0.9333
1CF3_NAG_A_605	85%	41%	0.098	0.963	1.3	1	1	1	0	0	100%	0.9333
8JPZ_NAG_B_606	78%	81%	0.117	0.959	0.41	0.41	-	-	0	0	100%	0.9333
3H0C_NAG_A_794	100%	56%	0.021	0.995	0.61	1.08	-	1	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333
3PPS_NAG_B_760	100%	44%	0.028	0.993	0.57	1.57	-	3	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.