Ligand validation:5VYP

GOL: GLYCEROL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5VYP_GOL_T_102	34%	90%	0.211	0.895	0.37	0.24	-	-	2	0	100%	1
5VYP_GOL_W_103	31%	88%	0.184	0.853	0.38	0.28	-	-	1	0	100%	1
5VYP_GOL_U_106	22%	90%	0.275	0.89	0.38	0.22	-	-	0	0	100%	1
5VYP_GOL_S_102	21%	89%	0.226	0.834	0.38	0.25	-	-	0	0	100%	1
5VYP_GOL_C_102	18%	89%	0.272	0.862	0.36	0.27	-	-	0	0	100%	1
5VYP_GOL_P_102	13%	90%	0.247	0.789	0.36	0.25	-	-	0	0	100%	1
5VYP_GOL_W_102	12%	87%	0.277	0.803	0.45	0.25	-	-	0	0	100%	1
5VYP_GOL_I_102	9%	89%	0.206	0.687	0.37	0.27	-	-	0	0	100%	1
5VYP_GOL_M_102	7%	91%	0.306	0.768	0.36	0.22	-	-	1	0	100%	1
5VYP_GOL_U_105	6%	89%	0.181	0.608	0.37	0.26	-	-	0	0	100%	1
5VYP_GOL_M_103	4%	88%	0.293	0.659	0.36	0.3	-	-	2	0	100%	1
5VYP_GOL_Q_102	0%	89%	0.492	0.449	0.33	0.32	-	-	4	0	100%	1
2YOQ_GOL_A_1196	100%	35%	0.024	0.996	0.38	2.12	-	2	0	0	100%	1
4KFD_GOL_D_806	100%	57%	0.024	0.995	0.41	1.21	-	-	0	0	100%	1
4KFE_GOL_E_803	100%	63%	0.024	0.995	0.31	1.07	-	-	0	0	100%	1
1M5Q_GOL_W_4006	100%	0%	0.027	0.992	4.89	6.2	5	3	0	0	100%	1
4Q6J_GOL_A_306	100%	33%	0.026	0.995	0.71	1.9	-	2	1	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.