1YJ: N-[4-({[(6R)-2-amino-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid
1YJ is a Ligand Of Interest in 5VYS designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5VYS_1YJ_A_301 | 35% | 3% | 0.11 | 0.91 | 2.78 | 3.38 | 4 | 5 | 0 | 0 | 38% | 0.375 |
5VYS_1YJ_B_301 | 11% | 3% | 0.232 | 0.864 | 2.77 | 3.37 | 4 | 5 | 0 | 0 | 38% | 0.375 |
4LY3_1YJ_A_301 | 85% | 18% | 0.086 | 0.952 | 1.53 | 1.96 | 1 | 18 | 0 | 0 | 100% | 1 |
5UIL_1YJ_B_401 | 65% | 25% | 0.132 | 0.933 | 1.45 | 1.61 | 2 | 10 | 0 | 0 | 100% | 1 |
4YFY_1YJ_A_302 | 63% | 23% | 0.134 | 0.93 | 1.48 | 1.71 | 1 | 11 | 0 | 0 | 100% | 1 |
6CI5_1YJ_A_303 | 22% | 1% | 0.158 | 0.883 | 6.32 | 2.09 | 9 | 4 | 0 | 0 | 41% | 0.4062 |