PGV: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
PGV is a Ligand Of Interest in 5X1B designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5X1B_PGV_C_302 | 95% | 52% | 0.078 | 0.981 | 0.92 | 0.93 | 2 | 4 | 0 | 0 | 100% | 1 |
5X1B_PGV_A_608 | 91% | 42% | 0.095 | 0.982 | 0.79 | 1.44 | 2 | 5 | 1 | 0 | 100% | 1 |
5X1B_PGV_P_303 | 88% | 48% | 0.102 | 0.978 | 0.93 | 1.08 | 2 | 5 | 3 | 0 | 100% | 1 |
5X1B_PGV_N_608 | 86% | 46% | 0.109 | 0.978 | 0.9 | 1.17 | 3 | 4 | 0 | 0 | 100% | 1 |
5X1B_PGV_G_103 | 21% | 48% | 0.195 | 0.804 | 1.07 | 0.95 | 2 | 2 | 2 | 0 | 100% | 1 |
5X1B_PGV_C_308 | 13% | 43% | 0.222 | 0.761 | 1.21 | 1.01 | 2 | 3 | 0 | 0 | 100% | 1 |
5X1B_PGV_A_609 | 5% | 44% | 0.256 | 0.654 | 1.1 | 1.08 | 2 | 5 | 0 | 0 | 100% | 1 |
5X1B_PGV_N_607 | 3% | 44% | 0.316 | 0.638 | 1.09 | 1.07 | 2 | 4 | 6 | 0 | 100% | 1 |
5B1A_PGV_P_303 | 98% | 35% | 0.064 | 0.985 | 1.06 | 1.51 | 3 | 13 | 4 | 0 | 100% | 1 |
5B1B_PGV_C_302 | 94% | 56% | 0.078 | 0.979 | 0.81 | 0.87 | 1 | 1 | 3 | 0 | 100% | 1 |
7YPY_PGV_P_302 | 94% | 54% | 0.079 | 0.978 | 0.79 | 0.99 | 2 | 2 | 1 | 0 | 100% | 1 |
7COH_PGV_C_267 | 93% | 49% | 0.087 | 0.983 | 0.87 | 1.09 | 3 | 3 | 0 | 0 | 100% | 1 |
5ZCQ_PGV_N_608 | 90% | 32% | 0.094 | 0.978 | 1.15 | 1.53 | 5 | 8 | 1 | 0 | 100% | 1 |