5YGK
DST: DIMETHYLALLYL S-THIOLODIPHOSPHATE
DST is a Ligand Of Interest in 5YGK designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
5YGK_DST_G_302 | 93% | 32% | 0.085 | 0.978 | 1.51 | 1.22 | 2 | 2 | 3 | 0 | 100% | 1 |
5YGK_DST_H_301 | 90% | 34% | 0.087 | 0.97 | 1.54 | 1.07 | 1 | 1 | 3 | 0 | 100% | 1 |
5YGK_DST_B_302 | 88% | 12% | 0.099 | 0.975 | 2.51 | 1.59 | 4 | 2 | 4 | 0 | 100% | 1 |
5YGK_DST_D_301 | 87% | 9% | 0.094 | 0.965 | 2.75 | 1.69 | 4 | 5 | 5 | 0 | 100% | 1 |
5YGK_DST_H_302 | 86% | 27% | 0.105 | 0.975 | 1.59 | 1.34 | 2 | 2 | 3 | 0 | 100% | 1 |
5YGK_DST_A_302 | 86% | 10% | 0.104 | 0.972 | 2.68 | 1.7 | 5 | 2 | 1 | 0 | 100% | 1 |
5YGK_DST_B_301 | 83% | 18% | 0.102 | 0.96 | 2.5 | 1.1 | 5 | 1 | 3 | 0 | 100% | 1 |
5YGK_DST_A_301 | 82% | 13% | 0.101 | 0.955 | 3.13 | 0.85 | 5 | - | 1 | 0 | 100% | 1 |
5YGK_DST_E_302 | 81% | 14% | 0.098 | 0.95 | 2.31 | 1.59 | 4 | 1 | 5 | 0 | 100% | 1 |
5YGK_DST_E_301 | 80% | 12% | 0.103 | 0.952 | 2.79 | 1.28 | 5 | 1 | 4 | 0 | 100% | 1 |
5YGK_DST_C_302 | 80% | 11% | 0.122 | 0.971 | 2.98 | 1.29 | 5 | 1 | 2 | 0 | 100% | 1 |
5YGK_DST_D_302 | 76% | 13% | 0.129 | 0.967 | 2.56 | 1.4 | 4 | 1 | 4 | 0 | 100% | 1 |
5YGK_DST_F_302 | 75% | 36% | 0.112 | 0.945 | 1.46 | 1.08 | 1 | 1 | 3 | 0 | 100% | 1 |
5YGK_DST_C_301 | 68% | 7% | 0.131 | 0.942 | 3.18 | 1.66 | 5 | 2 | 9 | 0 | 100% | 1 |
5YGK_DST_G_301 | 66% | 29% | 0.12 | 0.924 | 1.57 | 1.26 | 1 | 1 | 5 | 0 | 100% | 1 |
5YGK_DST_F_301 | 64% | 14% | 0.135 | 0.932 | 2.49 | 1.43 | 4 | 1 | 2 | 0 | 100% | 1 |
5INJ_DST_A_503 | 99% | 35% | 0.056 | 0.987 | 1.43 | 1.14 | 1 | 1 | 0 | 0 | 100% | 1 |
6OS6_DST_A_401 | 99% | 42% | 0.058 | 0.985 | 1.19 | 1.08 | 1 | 1 | 0 | 0 | 100% | 1 |
5YNV_DST_B_401 | 98% | 27% | 0.064 | 0.986 | 1.61 | 1.33 | 2 | 1 | 4 | 0 | 100% | 1 |
3I4X_DST_A_460 | 94% | 12% | 0.077 | 0.978 | 2.25 | 1.83 | 5 | 3 | 1 | 0 | 100% | 1 |
5Y72_DST_B_401 | 86% | 6% | 0.093 | 0.963 | 2.68 | 2.38 | 2 | 4 | 1 | 0 | 100% | 1 |