5AD: 5'-DEOXYADENOSINE
5AD is a Ligand Of Interest in 5YSH designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5YSH_5AD_A_605 | 53% | 22% | 0.124 | 0.953 | 1.35 | 1.9 | 1 | 3 | 1 | 0 | 61% | 0.6111 |
| 5YSH_5AD_D_605 | 48% | 22% | 0.122 | 0.936 | 1.43 | 1.79 | 2 | 2 | 1 | 0 | 61% | 0.6111 |
| 5YSH_5AD_G_605 | 34% | 23% | 0.144 | 0.895 | 1.33 | 1.84 | 1 | 2 | 1 | 0 | 61% | 0.6111 |
| 5YSH_5AD_J_605 | 17% | 23% | 0.185 | 0.833 | 1.3 | 1.86 | 1 | 4 | 2 | 0 | 61% | 0.6111 |
| 5YRV_5AD_G_605 | 98% | 28% | 0.062 | 0.981 | 1.02 | 1.85 | 1 | 3 | 2 | 0 | 100% | 1 |
| 5YRT_5AD_G_604 | 96% | 29% | 0.066 | 0.973 | 1.15 | 1.67 | 1 | 3 | 0 | 0 | 100% | 1 |
| 5HR6_5AD_A_503 | 100% | 15% | 0.031 | 0.996 | 0.97 | 2.72 | 1 | 5 | 1 | 0 | 100% | 1 |
| 3IIX_5AD_A_1501 | 100% | 35% | 0.038 | 0.982 | 1 | 1.55 | 2 | 2 | 1 | 0 | 100% | 1 |
| 5FEZ_5AD_A_408 | 98% | 30% | 0.053 | 0.977 | 1.19 | 1.57 | 2 | 3 | 1 | 0 | 100% | 1 |
| 8JBS_5AD_B_302 | 98% | 55% | 0.053 | 0.974 | 0.65 | 1.08 | - | 2 | 1 | 0 | 100% | 1 |
| 5EXK_5AD_I_403 | 97% | 60% | 0.063 | 0.98 | 0.66 | 0.86 | - | 1 | 0 | 0 | 100% | 1 |
