DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)
DGD is a Ligand Of Interest in 6JLL designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
6JLL_DGD_c_519 | 65% | 50% | 0.128 | 0.939 | 0.83 | 1.09 | 2 | 5 | 0 | 0 | 94% | 0.9394 |
6JLL_DGD_C_516 | 63% | 49% | 0.139 | 0.946 | 0.86 | 1.09 | 2 | 6 | 0 | 0 | 94% | 0.9394 |
6JLL_DGD_C_518 | 53% | 54% | 0.145 | 0.917 | 0.85 | 0.92 | 2 | 4 | 0 | 0 | 94% | 0.9394 |
6JLL_DGD_c_521 | 49% | 49% | 0.153 | 0.911 | 0.87 | 1.08 | 2 | 6 | 0 | 0 | 94% | 0.9394 |
6JLL_DGD_H_103 | 45% | 50% | 0.16 | 0.904 | 0.88 | 1.05 | 3 | 7 | 0 | 0 | 94% | 0.9394 |
6JLL_DGD_c_520 | 43% | 53% | 0.158 | 0.892 | 0.87 | 0.96 | 2 | 2 | 0 | 0 | 94% | 0.9394 |
6JLL_DGD_h_102 | 42% | 51% | 0.155 | 0.883 | 0.91 | 0.97 | 3 | 4 | 0 | 0 | 94% | 0.9394 |
6JLL_DGD_C_517 | 36% | 52% | 0.153 | 0.857 | 0.88 | 0.98 | 2 | 5 | 0 | 0 | 94% | 0.9394 |
6JLL_DGD_D_406 | 3% | 44% | 0.28 | 0.634 | 1 | 1.16 | 3 | 4 | 0 | 0 | 79% | 0.7879 |
6JLL_DGD_e_101 | 0% | 44% | 0.391 | 0.438 | 0.93 | 1.24 | 2 | 7 | 0 | 0 | 94% | 0.9394 |
5GTI_DGD_h_103 | 96% | 52% | 0.05 | 0.967 | 0.89 | 0.96 | 3 | 3 | 0 | 0 | 94% | 0.9394 |
5V2C_DGD_C_516 | 95% | 43% | 0.067 | 0.983 | 0.89 | 1.29 | 5 | 10 | 0 | 0 | 94% | 0.9394 |
5WS6_DGD_h_103 | 92% | 53% | 0.065 | 0.968 | 0.86 | 0.96 | 3 | 3 | 0 | 0 | 94% | 0.9394 |
7YQ7_DGD_C_518 | 87% | 51% | 0.084 | 0.967 | 0.83 | 1.07 | 3 | 5 | 0 | 0 | 94% | 0.9394 |
5B5E_DGD_c_919 | 87% | 44% | 0.076 | 0.957 | 0.94 | 1.23 | 3 | 10 | 0 | 0 | 94% | 0.9394 |
8IR5_DGD_C_515 | 86% | 47% | 0.092 | 0.97 | 0.81 | 1.21 | 2 | 8 | 0 | 0 | 94% | 0.9394 |