SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 7CJI designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 7CJI_SQD_a_409 | 49% | 33% | 0.195 | 0.944 | 0.98 | 1.66 | 3 | 11 | 0 | 0 | 100% | 1 |
| 7CJI_SQD_a_411 | 44% | 40% | 0.155 | 0.883 | 1.02 | 1.31 | 3 | 8 | 0 | 0 | 100% | 1 |
| 7CJI_SQD_C_501 | 41% | 26% | 0.195 | 0.909 | 0.97 | 1.98 | 3 | 11 | 0 | 0 | 100% | 1 |
| 7CJI_SQD_B_620 | 33% | 34% | 0.18 | 0.856 | 1.02 | 1.55 | 3 | 11 | 0 | 0 | 100% | 1 |
| 7CJI_SQD_A_411 | 30% | 39% | 0.173 | 0.835 | 1.06 | 1.33 | 3 | 8 | 0 | 0 | 100% | 1 |
| 7CJI_SQD_D_415 | 29% | 26% | 0.22 | 0.916 | 1.15 | 1.84 | 3 | 10 | 0 | 0 | 80% | 0.7963 |
| 7CJI_SQD_L_102 | 17% | 33% | 0.223 | 0.803 | 1.02 | 1.62 | 3 | 10 | 0 | 0 | 100% | 1 |
| 7CJI_SQD_f_102 | 2% | 37% | 0.465 | 0.76 | 1.16 | 1.29 | 3 | 6 | 0 | 0 | 80% | 0.7963 |
| 5V2C_SQD_a_413 | 94% | 21% | 0.075 | 0.976 | 1.12 | 2.14 | 4 | 12 | 0 | 0 | 100% | 1 |
| 5GTI_SQD_A_409 | 91% | 29% | 0.066 | 0.95 | 0.98 | 1.84 | 3 | 13 | 0 | 0 | 100% | 1 |
| 5WS6_SQD_A_411 | 87% | 30% | 0.084 | 0.954 | 0.94 | 1.81 | 3 | 13 | 0 | 0 | 100% | 1 |
| 6DHE_SQD_A_412 | 78% | 20% | 0.113 | 0.961 | 1.05 | 2.27 | 5 | 14 | 0 | 0 | 96% | 0.963 |
| 8IRC_SQD_a_411 | 77% | 29% | 0.119 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 1 |
| 8IR5_SQD_a_411 | 76% | 31% | 0.123 | 0.958 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 1 |
