SPM: SPERMINE
SPM is a Ligand Of Interest in 7D5E designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
7D5E_SPM_B_106 | 49% | 70% | 0.145 | 0.892 | 0.33 | 0.83 | - | - | 1 | 0 | 100% | 1 |
7D5E_SPM_B_105 | 37% | 76% | 0.126 | 0.82 | 0.32 | 0.62 | - | - | 1 | 0 | 100% | 1 |
7D5E_SPM_A_104 | 34% | 71% | 0.186 | 0.868 | 0.35 | 0.74 | - | - | 1 | 0 | 100% | 1 |
7D5E_SPM_A_105 | 13% | 73% | 0.177 | 0.72 | 0.33 | 0.72 | - | - | 1 | 0 | 100% | 1 |
6E1X_SPM_C_201 | 93% | 57% | 0.061 | 0.956 | 0.57 | 1.05 | - | - | 2 | 0 | 100% | 1 |
4MJ8_SPM_A_201 | 84% | 64% | 0.098 | 0.96 | 0.41 | 0.97 | - | - | 0 | 0 | 100% | 1 |
4MI4_SPM_A_201 | 84% | 61% | 0.096 | 0.957 | 0.73 | 0.76 | - | - | 0 | 0 | 100% | 1 |
1ICK_SPM_A_21 | 79% | 4% | 0.103 | 0.95 | 2.74 | 2.83 | 1 | 3 | 1 | 0 | 100% | 0.8929 |
3C6M_SPM_B_501 | 75% | 67% | 0.134 | 0.969 | 0.42 | 0.83 | - | - | 1 | 0 | 100% | 1 |