Ligand validation:8GCQ

PGV: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE

PGV is a Ligand Of Interest in 8GCQ designated by the Author

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
8GCQ_PGV_C_305	60%	77%	0.174	0.96	0.37	0.55	-	-	2	0	100%	1
8GCQ_PGV_C_301	59%	74%	0.164	0.947	0.33	0.67	-	2	0	0	100%	1
8GCQ_PGV_N_605	51%	73%	0.185	0.939	0.31	0.74	-	2	1	0	100%	1
8GCQ_PGV_P_305	49%	79%	0.192	0.939	0.33	0.52	-	-	1	0	100%	1
8GCQ_PGV_P_306	27%	86%	0.212	0.857	0.32	0.39	-	-	1	0	100%	1
8GCQ_PGV_A_604	17%	81%	0.25	0.833	0.32	0.5	-	-	2	0	100%	1
8GCQ_PGV_H_101	17%	86%	0.231	0.811	0.31	0.41	-	-	1	0	100%	1
8GCQ_PGV_N_610	5%	87%	0.379	0.789	0.32	0.38	-	-	1	0	100%	1
5B1A_PGV_P_303	98%	35%	0.064	0.985	1.06	1.51	3	13	4	0	100%	1
5X1B_PGV_C_302	95%	52%	0.078	0.981	0.92	0.93	2	4	0	0	100%	1
5B1B_PGV_C_302	94%	56%	0.078	0.979	0.81	0.87	1	1	3	0	100%	1
7YPY_PGV_P_302	94%	54%	0.079	0.978	0.79	0.99	2	2	1	0	100%	1
7COH_PGV_C_267	93%	49%	0.087	0.983	0.87	1.09	3	3	0	0	100%	1
5ZCQ_PGV_N_608	90%	32%	0.094	0.978	1.15	1.53	5	8	1	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.